98 items (Drosophila ananassae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DanaGF12227	Uncharacterized protein; Belongs to the DEAD box helicase family. (522 aa)
	DanaGF11077	Sm domain-containing protein. (278 aa)
	DanaGF12183	Uncharacterized protein, isoform A. (511 aa)
	DanaGF14100	COMM domain-containing protein. (204 aa)
	DanaGF15435	Uncharacterized protein. (421 aa)
	DanaGF14460	Uncharacterized protein, isoform A. (453 aa)
	DanaGF14957	Uncharacterized protein, isoform A. (594 aa)
	DanaGF15481	RING-type domain-containing protein. (423 aa)
	DanaGF14865	RRM domain-containing protein. (241 aa)
	DanaGF15595	Uncharacterized protein, isoform B; Belongs to the DEAD box helicase family. (403 aa)
	DanaGF15122	Uncharacterized protein, isoform A. (1375 aa)
	DanaGF14747	Uncharacterized protein, isoform A. (424 aa)
	DanaGF15173	Uncharacterized protein, isoform B. (896 aa)
	DanaGF15672	RRM domain-containing protein. (199 aa)
	DanaGF14192	Uncharacterized protein, isoform C. (840 aa)
	DanaGF15723	RRM domain-containing protein. (514 aa)
	DanaGF14632	Uncharacterized protein; Belongs to the MT-A70-like family. (397 aa)
	DanaGF14123	Uncharacterized protein, isoform A. (195 aa)
	DanaGF21236	Uncharacterized protein. (1183 aa)
	DanaGF20995	Uncharacterized protein, isoform A. (996 aa)
	DanaGF20968	Uncharacterized protein, isoform J. (379 aa)
	DanaGF21334	Uncharacterized protein. (218 aa)
	DanaGF21364	Uncharacterized protein. (1037 aa)
	snRNP-U1-C	U1 small nuclear ribonucleoprotein C; Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA; Belongs to the U1 small nuclear ribonucleoprotein C family. (147 aa)
	DanaGF24893	Uncharacterized protein. (267 aa)
	DanaGF15900	Uncharacterized protein, isoform A. (401 aa)
	DanaGF19500	RRM domain-containing protein. (161 aa)
	DanaGF19403	DUF2040 domain-containing protein. (387 aa)
	DanaGF22206	TPR_REGION domain-containing protein. (688 aa)
	DanaGF19208	Uncharacterized protein. (607 aa)
	DanaGF19051	Uncharacterized protein. (1160 aa)
	DanaGF15956	Uncharacterized protein. (1230 aa)
	DanaGF13891	Uncharacterized protein, isoform A. (938 aa)
	DanaGF20724	Uncharacterized protein. (1424 aa)
	DanaGF20765	Uncharacterized protein. (2236 aa)
	DanaGF17370	Uncharacterized protein, isoform A. (343 aa)
	DanaGF18634	Uncharacterized protein, isoform A; Belongs to the DEAD box helicase family. (704 aa)
	DanaGF17499	Uncharacterized protein. (542 aa)
	DanaGF18589	Uncharacterized protein, isoform C. (1054 aa)
	DanaGF13528	Uncharacterized protein, isoform D. (271 aa)
	DanaGF17020	Uncharacterized protein, isoform B. (2075 aa)
	DanaGF27511	Uncharacterized protein. (841 aa)
	DanaGF23405	Uncharacterized protein. (287 aa)
	DanaGF19596	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (459 aa)
	DanaGF13021	Uncharacterized protein, isoform B. (397 aa)
	DanaGF11449	Uncharacterized protein, isoform S. (1018 aa)
	DanaGF10597	Uncharacterized protein, isoform C. (986 aa)
	DanaGF14472	Uncharacterized protein, isoform B. (258 aa)
	DanaGF20555	RING-type domain-containing protein. (621 aa)
	DanaGF14193	Uncharacterized protein, isoform D. (911 aa)
	DanaGF17608	Uncharacterized protein, isoform B. (355 aa)
	DanaGF27195	KH_dom_type_1 domain-containing protein. (69 aa)
	DanaGF11894	Uncharacterized protein, isoform D. (493 aa)
	DanaGF27205	Uncharacterized protein, isoform A. (360 aa)
	DanaGF18875	Uncharacterized protein, isoform C. (506 aa)
	DanaGF27922	CCHC-type domain-containing protein. (284 aa)
	DanaGF18582	Uncharacterized protein, isoform B. (359 aa)
	DanaGF18066	Uncharacterized protein, isoform B. (433 aa)
	DanaGF27062	Uncharacterized protein, isoform B. (245 aa)
	DanaGF10884	Uncharacterized protein, isoform B. (829 aa)
	DanaGF17214	Uncharacterized protein, isoform B. (719 aa)
	DanaGF10271	YTH domain-containing protein. (713 aa)
	DanaGF24817	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
	DanaGF23713	CG9383-PA. (220 aa)
	DanaGF23899	Uncharacterized protein, isoform A. (713 aa)
	DanaGF18563	Uncharacterized protein, isoform A. (474 aa)
	DanaGF17033	Uncharacterized protein; Belongs to the MT-A70-like family. (608 aa)
	DanaGF17967	Uncharacterized protein, isoform A. (471 aa)
	DanaGF17954	Uncharacterized protein. (1976 aa)
	DanaGF16525	Uncharacterized protein. (253 aa)
	DanaGF18480	Uncharacterized protein. (882 aa)
	DanaGF17916	Uncharacterized protein. (792 aa)
	DanaGF17902	Uncharacterized protein, isoform A. (163 aa)
	DanaGF16563	Uncharacterized protein. (990 aa)
	DanaGF18303	Uncharacterized protein, isoform A. (2184 aa)
	DanaGF17279	Uncharacterized protein. (418 aa)
	DanaGF16243	Uncharacterized protein, isoform A. (952 aa)
	DanaGF18738	Uncharacterized protein. (1195 aa)
	DanaGF17368	Uncharacterized protein. (385 aa)
	DanaGF23653	Uncharacterized protein. (931 aa)
	DanaGF25026	Uncharacterized protein. (1037 aa)
	DanaGF25032	Uncharacterized protein. (643 aa)
	DanaGF24750	Uncharacterized protein, isoform A; Belongs to the DEAD box helicase family. (613 aa)
	DanaGF23561	Uncharacterized protein, isoform A. (650 aa)
	DanaGF10367	Uncharacterized protein. (2142 aa)
	DanaGF24062	PWI domain-containing protein. (978 aa)
	bru-3	Bruno-3, isoform A. (422 aa)
	DanaGF12812	Uncharacterized protein, isoform A. (3199 aa)
	DanaGF12026	Uncharacterized protein. (1251 aa)
	DanaGF13443	Uncharacterized protein, isoform A. (832 aa)
	DanaGF12947	Uncharacterized protein. (505 aa)
	DanaGF11890	KH domain-containing protein. (390 aa)
	DanaGF13022	KH domain-containing protein. (316 aa)
	DanaGF13124	KH domain-containing protein. (626 aa)
	DanaGF13651	Uncharacterized protein. (795 aa)
	DanaGF11771	VIR_N domain-containing protein. (1842 aa)
	DanaGF13706	Uncharacterized protein. (882 aa)
	DanaGF11164	Uncharacterized protein. (410 aa)

Your Current Organism:

Drosophila ananassae

NCBI taxonomy Id: 7217
Other names: D. ananassae, Drosophila annanassae

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DanaGF10271	DanaGF11164	B3M836	B3MHE2	YTH domain-containing protein.	Uncharacterized protein.	0.875
DanaGF10271	DanaGF11771	B3M836	B3MGP2	YTH domain-containing protein.	VIR_N domain-containing protein.	0.806
DanaGF10271	DanaGF13651	B3M836	B3MGC0	YTH domain-containing protein.	Uncharacterized protein.	0.593
DanaGF10271	DanaGF14123	B3M836	B3MPP3	YTH domain-containing protein.	Uncharacterized protein, isoform A.	0.537
DanaGF10271	DanaGF14632	B3M836	B3MPG5	YTH domain-containing protein.	Uncharacterized protein; Belongs to the MT-A70-like family.	0.928
DanaGF10271	DanaGF14747	B3M836	B3MMZ5	YTH domain-containing protein.	Uncharacterized protein, isoform A.	0.509
DanaGF10271	DanaGF15481	B3M836	B3ML73	YTH domain-containing protein.	RING-type domain-containing protein.	0.800
DanaGF10271	DanaGF15672	B3M836	B3MNT9	YTH domain-containing protein.	RRM domain-containing protein.	0.491
DanaGF10271	DanaGF16243	B3M836	B3LYA5	YTH domain-containing protein.	Uncharacterized protein, isoform A.	0.600
DanaGF10271	DanaGF16525	B3M836	B3M2I4	YTH domain-containing protein.	Uncharacterized protein.	0.638
DanaGF10271	DanaGF17033	B3M836	B3M303	YTH domain-containing protein.	Uncharacterized protein; Belongs to the MT-A70-like family.	0.894
DanaGF10271	DanaGF19051	B3M836	B3MZW3	YTH domain-containing protein.	Uncharacterized protein.	0.695
DanaGF10271	DanaGF19208	B3M836	B3MZN2	YTH domain-containing protein.	Uncharacterized protein.	0.524
DanaGF10271	DanaGF20968	B3M836	B3MRN2	YTH domain-containing protein.	Uncharacterized protein, isoform J.	0.780
DanaGF10271	DanaGF21364	B3M836	B3MRX5	YTH domain-containing protein.	Uncharacterized protein.	0.653
DanaGF10271	DanaGF23561	B3M836	B3M9E4	YTH domain-containing protein.	Uncharacterized protein, isoform A.	0.896
DanaGF10367	DanaGF12026	B3M9U8	B3MD00	Uncharacterized protein.	Uncharacterized protein.	0.770
DanaGF10367	DanaGF12947	B3M9U8	B3MDG5	Uncharacterized protein.	Uncharacterized protein.	0.984
DanaGF10367	DanaGF13706	B3M9U8	B3MHD2	Uncharacterized protein.	Uncharacterized protein.	0.988
DanaGF10367	DanaGF14460	B3M9U8	B3MKT2	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.906