(12 nodes) RISC complex assembly network (Drosophila ananassae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DanaGF17149	Uncharacterized protein. (1185 aa)
	DanaGF10056	Uncharacterized protein, isoform A. (1019 aa)
	DanaGF20110	HATPase_c domain-containing protein. (716 aa)
	DanaGF25145	Uncharacterized protein. (415 aa)
	DanaGF11153	Uncharacterized protein, isoform A; Belongs to the argonaute family. (984 aa)
	DanaGF21495	Uncharacterized protein. (789 aa)
	DanaGF23063	CS domain-containing protein. (182 aa)
	DanaGF21798	Uncharacterized protein. (316 aa)
	DanaGF23153	Uncharacterized protein, isoform A. (472 aa)
	DanaGF11377	Uncharacterized protein; Belongs to the heat shock protein 70 family. (650 aa)
	DanaGF24211	Uncharacterized protein, isoform C. (1268 aa)
	DanaGF18290	Uncharacterized protein. (2252 aa)

Your Current Organism:

Drosophila ananassae

NCBI taxonomy Id: 7217
Other names: D. ananassae, Drosophila annanassae

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DanaGF10056	DanaGF11153	B3M505	B3MHG1	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform A; Belongs to the argonaute family.	0.905
DanaGF10056	DanaGF18290	B3M505	B3LZQ9	Uncharacterized protein, isoform A.	Uncharacterized protein.	0.906
DanaGF10056	DanaGF21798	B3M505	B3MV17	Uncharacterized protein, isoform A.	Uncharacterized protein.	0.801
DanaGF10056	DanaGF23153	B3M505	B3MV96	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform A.	0.914
DanaGF11153	DanaGF10056	B3MHG1	B3M505	Uncharacterized protein, isoform A; Belongs to the argonaute family.	Uncharacterized protein, isoform A.	0.905
DanaGF11153	DanaGF18290	B3MHG1	B3LZQ9	Uncharacterized protein, isoform A; Belongs to the argonaute family.	Uncharacterized protein.	0.995
DanaGF11153	DanaGF20110	B3MHG1	B3M5T3	Uncharacterized protein, isoform A; Belongs to the argonaute family.	HATPase_c domain-containing protein.	0.546
DanaGF11153	DanaGF21798	B3MHG1	B3MV17	Uncharacterized protein, isoform A; Belongs to the argonaute family.	Uncharacterized protein.	0.880
DanaGF11153	DanaGF23153	B3MHG1	B3MV96	Uncharacterized protein, isoform A; Belongs to the argonaute family.	Uncharacterized protein, isoform A.	0.995
DanaGF11153	DanaGF24211	B3MHG1	A0A0N8P0X1	Uncharacterized protein, isoform A; Belongs to the argonaute family.	Uncharacterized protein, isoform C.	0.504
DanaGF11377	DanaGF20110	B3MX94	B3M5T3	Uncharacterized protein; Belongs to the heat shock protein 70 family.	HATPase_c domain-containing protein.	0.919
DanaGF11377	DanaGF23063	B3MX94	B3MTT1	Uncharacterized protein; Belongs to the heat shock protein 70 family.	CS domain-containing protein.	0.540
DanaGF18290	DanaGF10056	B3LZQ9	B3M505	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.906
DanaGF18290	DanaGF11153	B3LZQ9	B3MHG1	Uncharacterized protein.	Uncharacterized protein, isoform A; Belongs to the argonaute family.	0.995
DanaGF18290	DanaGF21798	B3LZQ9	B3MV17	Uncharacterized protein.	Uncharacterized protein.	0.947
DanaGF18290	DanaGF23153	B3LZQ9	B3MV96	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.999
DanaGF20110	DanaGF11153	B3M5T3	B3MHG1	HATPase_c domain-containing protein.	Uncharacterized protein, isoform A; Belongs to the argonaute family.	0.546
DanaGF20110	DanaGF11377	B3M5T3	B3MX94	HATPase_c domain-containing protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.919
DanaGF20110	DanaGF23063	B3M5T3	B3MTT1	HATPase_c domain-containing protein.	CS domain-containing protein.	0.997
DanaGF20110	DanaGF25145	B3M5T3	B3MAB3	HATPase_c domain-containing protein.	Uncharacterized protein.	0.956