(27 nodes) RmlC-like jelly roll fold network (Drosophila ananassae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	sws	Neuropathy target esterase sws; Phospholipase B that deacylates intracellular phosphatidylcholine (PtdCho), generating glycerophosphocholine (GroPtdCho). This deacylation occurs at both sn-2 and sn-1 positions of PtdCho. Its specific chemical modification by certain organophosphorus (OP) compounds leads to distal axonopathy. Plays a role in the signaling mechanism between neurons and glia that regulates glia wrapping during development of the adult brain. Essential for membrane lipid homeostasis and cell survival in both neurons and glia of the adult brain (By similarity); Belongs to t [...] (1514 aa)
	DanaGF15745	Uncharacterized protein, isoform B. (1041 aa)
	DanaGF14659	Uncharacterized protein, isoform A. (1076 aa)
	DanaGF14763	Uncharacterized protein. (438 aa)
	DanaGF14873	cGMP-dependent protein kinase. (780 aa)
	DanaGF14515	Uncharacterized protein, isoform D. (1577 aa)
	DanaGF11623	Cyclic nucleotide-binding domain-containing protein. (1027 aa)
	DanaGF11684	Uncharacterized protein. (1291 aa)
	DanaGF13729	Uncharacterized protein, isoform A. (376 aa)
	DanaGF11362	Uncharacterized protein, isoform A. (853 aa)
	DanaGF12941	Cysteine dioxygenase. (238 aa)
	DanaGF10950	JmjC domain-containing protein. (315 aa)
	DanaGF10605	1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; Catalyzes the formation of formate and 2-keto-4- methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene). (186 aa)
	DanaGF10483	Uncharacterized protein. (243 aa)
	DanaGF18662	Uncharacterized protein. (1260 aa)
	DanaGF17086	Uncharacterized protein, isoform B. (589 aa)
	DanaGF13789	Uncharacterized protein, isoform C. (1006 aa)
	DanaGF11279	Uncharacterized protein, isoform B. (839 aa)
	DanaGF21712	Uncharacterized protein, isoform C. (402 aa)
	DanaGF11328	Uncharacterized protein, isoform D. (1218 aa)
	DanaGF13492	Uncharacterized protein, isoform B. (1350 aa)
	DanaGF26871	Uncharacterized protein, isoform B. (890 aa)
	DanaGF27014	Cyclic nucleotide-binding domain-containing protein. (163 aa)
	DanaGF24284	Uncharacterized protein, isoform C. (377 aa)
	DanaGF21038	Uncharacterized protein, isoform G. (1985 aa)
	DanaGF23036	Mannose-6-phosphate isomerase. (396 aa)
	DanaGF22073	Cyclic nucleotide-binding domain-containing protein. (741 aa)

Your Current Organism:

Drosophila ananassae

NCBI taxonomy Id: 7217
Other names: D. ananassae, Drosophila annanassae

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DanaGF10483	DanaGF12941	B3M422	B3MDF0	Uncharacterized protein.	Cysteine dioxygenase.	0.574
DanaGF11279	DanaGF11623	A0A0P9AGQ2	B3MIZ4	Uncharacterized protein, isoform B.	Cyclic nucleotide-binding domain-containing protein.	0.986
DanaGF11328	DanaGF11623	A0A0P8XQU4	B3MIZ4	Uncharacterized protein, isoform D.	Cyclic nucleotide-binding domain-containing protein.	0.942
DanaGF11623	DanaGF11279	B3MIZ4	A0A0P9AGQ2	Cyclic nucleotide-binding domain-containing protein.	Uncharacterized protein, isoform B.	0.986
DanaGF11623	DanaGF11328	B3MIZ4	A0A0P8XQU4	Cyclic nucleotide-binding domain-containing protein.	Uncharacterized protein, isoform D.	0.942
DanaGF11623	DanaGF21038	B3MIZ4	A0A0N8NZR6	Cyclic nucleotide-binding domain-containing protein.	Uncharacterized protein, isoform G.	0.907
DanaGF12941	DanaGF10483	B3MDF0	B3M422	Cysteine dioxygenase.	Uncharacterized protein.	0.574
DanaGF13729	DanaGF24284	B3MHI6	A0A0N8P0W0	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform C.	0.643
DanaGF21038	DanaGF11623	A0A0N8NZR6	B3MIZ4	Uncharacterized protein, isoform G.	Cyclic nucleotide-binding domain-containing protein.	0.907
DanaGF24284	DanaGF13729	A0A0N8P0W0	B3MHI6	Uncharacterized protein, isoform C.	Uncharacterized protein, isoform A.	0.643