(9 nodes) Spectrin/alpha-actinin network (Drosophila ananassae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DanaGF11157	Uncharacterized protein, isoform AU. (8872 aa)
	DanaGF14378	Uncharacterized protein, isoform B. (12280 aa)
	DanaGF24962	Uncharacterized protein, isoform D. (2458 aa)
	DanaGF24935	Uncharacterized protein, isoform E. (3619 aa)
	DanaGF16554	Uncharacterized protein, isoform O. (3604 aa)
	DanaGF10082	Uncharacterized protein, isoform A. (2260 aa)
	DanaGF24206	Uncharacterized protein, isoform I. (4365 aa)
	DanaGF21987	Uncharacterized protein, isoform B. (917 aa)
	DanaGF21115	Spectrin beta chain; Belongs to the spectrin family. (2308 aa)

Your Current Organism:

Drosophila ananassae

NCBI taxonomy Id: 7217
Other names: D. ananassae, Drosophila annanassae

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DanaGF11157	DanaGF21115	A0A0P8XRE8	A0A0P8XJK4	Uncharacterized protein, isoform AU.	Spectrin beta chain; Belongs to the spectrin family.	0.461
DanaGF11157	DanaGF24206	A0A0P8XRE8	B3M838	Uncharacterized protein, isoform AU.	Uncharacterized protein, isoform I.	0.519
DanaGF11157	DanaGF24962	A0A0P8XRE8	A0A0P8Y852	Uncharacterized protein, isoform AU.	Uncharacterized protein, isoform D.	0.684
DanaGF16554	DanaGF21987	A0A0P9AS53	B3MYQ6	Uncharacterized protein, isoform O.	Uncharacterized protein, isoform B.	0.891
DanaGF21115	DanaGF11157	A0A0P8XJK4	A0A0P8XRE8	Spectrin beta chain; Belongs to the spectrin family.	Uncharacterized protein, isoform AU.	0.461
DanaGF21115	DanaGF24962	A0A0P8XJK4	A0A0P8Y852	Spectrin beta chain; Belongs to the spectrin family.	Uncharacterized protein, isoform D.	0.996
DanaGF21987	DanaGF16554	B3MYQ6	A0A0P9AS53	Uncharacterized protein, isoform B.	Uncharacterized protein, isoform O.	0.891
DanaGF24206	DanaGF11157	B3M838	A0A0P8XRE8	Uncharacterized protein, isoform I.	Uncharacterized protein, isoform AU.	0.519
DanaGF24206	DanaGF24962	B3M838	A0A0P8Y852	Uncharacterized protein, isoform I.	Uncharacterized protein, isoform D.	0.996
DanaGF24962	DanaGF11157	A0A0P8Y852	A0A0P8XRE8	Uncharacterized protein, isoform D.	Uncharacterized protein, isoform AU.	0.684
DanaGF24962	DanaGF21115	A0A0P8Y852	A0A0P8XJK4	Uncharacterized protein, isoform D.	Spectrin beta chain; Belongs to the spectrin family.	0.996
DanaGF24962	DanaGF24206	A0A0P8Y852	B3M838	Uncharacterized protein, isoform D.	Uncharacterized protein, isoform I.	0.996