13 items (Drosophila ananassae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DanaGF21231	Uncharacterized protein. (1022 aa)
	DanaGF10846	Uncharacterized protein. (412 aa)
	DanaGF24152	Uncharacterized protein, isoform A. (999 aa)
	DanaGF11684	Uncharacterized protein. (1291 aa)
	DanaGF19442	Uncharacterized protein. (723 aa)
	DanaGF19565	Uncharacterized protein, isoform C. (570 aa)
	DanaGF18823	Uncharacterized protein, isoform B. (1601 aa)
	per	Period, isoform C. (1313 aa)
	DanaGF24890	Uncharacterized protein, isoform E. (988 aa)
	DanaGF17581	Uncharacterized protein. (718 aa)
	DanaGF18433	Uncharacterized protein, isoform A. (648 aa)
	DanaGF16518	Uncharacterized protein. (1006 aa)
	DanaGF16506	Uncharacterized protein, isoform A. (948 aa)

Your Current Organism:

Drosophila ananassae

NCBI taxonomy Id: 7217
Other names: D. ananassae, Drosophila annanassae

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DanaGF10846	DanaGF16506	B3M8U5	B3M2U2	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.952
DanaGF10846	DanaGF16518	B3M8U5	B3M2J3	Uncharacterized protein.	Uncharacterized protein.	0.825
DanaGF10846	DanaGF17581	B3M8U5	B3LX41	Uncharacterized protein.	Uncharacterized protein.	0.559
DanaGF10846	DanaGF18823	B3M8U5	A0A0P8Y1I8	Uncharacterized protein.	Uncharacterized protein, isoform B.	0.709
DanaGF10846	DanaGF19442	B3M8U5	B3MXI8	Uncharacterized protein.	Uncharacterized protein.	0.904
DanaGF10846	DanaGF21231	B3M8U5	B3MR82	Uncharacterized protein.	Uncharacterized protein.	0.904
DanaGF10846	DanaGF24152	B3M8U5	B3M967	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.999
DanaGF10846	DanaGF24890	B3M8U5	A0A0P8ZSR0	Uncharacterized protein.	Uncharacterized protein, isoform E.	0.690
DanaGF10846	per	B3M8U5	A0A0P8Y7B3	Uncharacterized protein.	Period, isoform C.	0.977
DanaGF16506	DanaGF10846	B3M2U2	B3M8U5	Uncharacterized protein, isoform A.	Uncharacterized protein.	0.952
DanaGF16506	DanaGF17581	B3M2U2	B3LX41	Uncharacterized protein, isoform A.	Uncharacterized protein.	0.431
DanaGF16506	DanaGF18433	B3M2U2	B3M201	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform A.	0.995
DanaGF16506	DanaGF19442	B3M2U2	B3MXI8	Uncharacterized protein, isoform A.	Uncharacterized protein.	0.803
DanaGF16506	DanaGF21231	B3M2U2	B3MR82	Uncharacterized protein, isoform A.	Uncharacterized protein.	0.803
DanaGF16506	DanaGF24152	B3M2U2	B3M967	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform A.	0.803
DanaGF16518	DanaGF10846	B3M2J3	B3M8U5	Uncharacterized protein.	Uncharacterized protein.	0.825
DanaGF16518	DanaGF18433	B3M2J3	B3M201	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.996
DanaGF16518	DanaGF19442	B3M2J3	B3MXI8	Uncharacterized protein.	Uncharacterized protein.	0.825
DanaGF16518	DanaGF21231	B3M2J3	B3MR82	Uncharacterized protein.	Uncharacterized protein.	0.825
DanaGF16518	DanaGF24152	B3M2J3	B3M967	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.825