29 items (Drosophila grimshawi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DgriGH24529	GH24529. (99 aa)
	DgriGH24320	GH24320. (224 aa)
	DgriGH13541	GH13541. (259 aa)
	GH13339	Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. (419 aa)
	DgriGH13671	GH13671. (156 aa)
	DgriGH18486	GH18486. (2065 aa)
	DgriGH22910	GH22910. (205 aa)
	DgriGH15310	GH15310. (814 aa)
	DgriGH14686	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (344 aa)
	DgriGH17878	Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. (836 aa)
	DgriGH25200	GH25200. (232 aa)
	GH25074	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (635 aa)
	eIF6	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (245 aa)
	DgriGH12638	Protein MAK16 homolog; Belongs to the MAK16 family. (351 aa)
	DgriGH23436	GH23436. (201 aa)
	DgriGH12544	GH12544. (151 aa)
	DgriGH19240	GH19240. (911 aa)
	DgriGH10194	GH10194. (400 aa)
	DgriGH19820	GH19820. (717 aa)
	DgriGH22060	GH22060. (296 aa)
	GH22027	Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (786 aa)
	DgriGH20545	GH20545. (403 aa)
	DgriGH20546	GH20546. (288 aa)
	DgriGH20673	GH20673. (300 aa)
	DgriGH21165	GH21165. (666 aa)
	DgriGH16572	GH16572. (501 aa)
	DgriGH15944	GH15944. (312 aa)
	DgriGH14641	GH14641. (415 aa)
	DgriGH13429	GH13429. (1067 aa)

Your Current Organism:

Drosophila grimshawi

NCBI taxonomy Id: 7222
Other names: D. grimshawi, Idiomyia grimshawi

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DgriGH10194	DgriGH12638	B4JBL6	B4JKD1	GH10194.	Protein MAK16 homolog; Belongs to the MAK16 family.	0.997
DgriGH10194	DgriGH13429	B4JBL6	B4JPC7	GH10194.	GH13429.	0.501
DgriGH10194	DgriGH13541	B4JBL6	B4JPL2	GH10194.	GH13541.	0.979
DgriGH10194	DgriGH14686	B4JBL6	B4IXK7	GH10194.	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	0.930
DgriGH10194	DgriGH15310	B4JBL6	B4IWM7	GH10194.	GH15310.	0.515
DgriGH10194	DgriGH16572	B4JBL6	B4J1P8	GH10194.	GH16572.	0.439
DgriGH10194	DgriGH17878	B4JBL6	B4JX39	GH10194.	Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.	0.970
DgriGH10194	DgriGH19240	B4JBL6	B4JF39	GH10194.	GH19240.	0.546
DgriGH10194	DgriGH21165	B4JBL6	B4J6P0	GH10194.	GH21165.	0.613
DgriGH10194	DgriGH22060	B4JBL6	B4J9X0	GH10194.	GH22060.	0.547
DgriGH10194	DgriGH22910	B4JBL6	B4JVT1	GH10194.	GH22910.	0.884
DgriGH10194	DgriGH23436	B4JBL6	B4K4C4	GH10194.	GH23436.	0.956
DgriGH10194	DgriGH24320	B4JBL6	B4JMI9	GH10194.	GH24320.	0.544
DgriGH10194	GH13339	B4JBL6	B4JPT9	GH10194.	Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.	0.986
DgriGH10194	GH22027	B4JBL6	B4J9K1	GH10194.	Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.	0.983
DgriGH10194	GH25074	B4JBL6	B4JZG8	GH10194.	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	0.956
DgriGH10194	eIF6	B4JBL6	B4K0F6	GH10194.	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	0.884
DgriGH12544	DgriGH13429	B4JJU9	B4JPC7	GH12544.	GH13429.	0.985
DgriGH12544	DgriGH13541	B4JJU9	B4JPL2	GH12544.	GH13541.	0.577
DgriGH12544	DgriGH13671	B4JJU9	B4JQC2	GH12544.	GH13671.	0.968