42 items (Drosophila grimshawi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DgriGH19392	GH19392. (1708 aa)
	DgriGH22956	GH22956. (189 aa)
	DgriGH17763	GH17763. (287 aa)
	DgriGH14266	GH14266. (609 aa)
	DgriGH23180	GH23180. (215 aa)
	DgriGH10460	GH10460. (1119 aa)
	DgriGH10448	GH10448. (873 aa)
	DgriGH17621	GH17621. (626 aa)
	DgriGH18707	GH18707. (157 aa)
	DgriGH13227	GH13227; Belongs to the aldehyde dehydrogenase family. (518 aa)
	DgriGH13324	GH13324; Belongs to the aldehyde dehydrogenase family. (521 aa)
	DgriGH24058	GH24058. (386 aa)
	DgriGH12684	Serine--pyruvate aminotransferase. (395 aa)
	DgriGH12411	GH12411. (215 aa)
	DgriGH18738	S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (379 aa)
	DgriGH18971	GH18971. (238 aa)
	DgriGH18972	GH18972. (221 aa)
	DgriGH18029	Putative hydroxypyruvate isomerase; Catalyzes the reversible isomerization between hydroxypyruvate and 2-hydroxy-3-oxopropanoate (also termed tartronate semialdehyde); Belongs to the hyi family. (264 aa)
	DgriGH23926	S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde. (285 aa)
	DgriGH18200	GH18200. (1267 aa)
	DgriGH14581	GH14581. (146 aa)
	DgriGH14580	GH14580. (304 aa)
	DgriGH15599	GH15599; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (261 aa)
	DgriGH16073	GH16073; Belongs to the G-protein coupled receptor 1 family. (595 aa)
	DgriGH16754	GH16754. (303 aa)
	DgriGH14768	GH14768; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (503 aa)
	DgriGH20598	GH20598. (105 aa)
	DgriGH20599	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (430 aa)
	DgriGH21876	GH21876; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (334 aa)
	DgriGH21880	GH21880; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (325 aa)
	DgriGH21881	GH21881; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (304 aa)
	DgriGH21882	GH21882; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (325 aa)
	DgriGH21883	GH21883. (573 aa)
	DgriGH10587	GH10587; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (356 aa)
	DgriGH11282	GH11282. (215 aa)
	DgriGH18391	Triosephosphate isomerase. (306 aa)
	DgriGH18259	GH18259; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (324 aa)
	DgriGH19388	GH19388. (1259 aa)
	DgriGH19389	GH19389. (1252 aa)
	DgriGH19390	GH19390. (1268 aa)
	DgriGH19391	GH19391. (1216 aa)
	DgriGH19396	GH19396. (1267 aa)

Your Current Organism:

Drosophila grimshawi

NCBI taxonomy Id: 7222
Other names: D. grimshawi, Idiomyia grimshawi

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DgriGH10448	DgriGH10460	B4K1P7	B4K1P6	GH10448.	GH10460.	0.654
DgriGH10448	DgriGH18200	B4K1P7	B4JFV1	GH10448.	GH18200.	0.652
DgriGH10448	DgriGH19388	B4K1P7	B4JFT7	GH10448.	GH19388.	0.658
DgriGH10448	DgriGH19389	B4K1P7	B4JFT8	GH10448.	GH19389.	0.658
DgriGH10448	DgriGH19390	B4K1P7	B4JFT9	GH10448.	GH19390.	0.660
DgriGH10448	DgriGH19391	B4K1P7	B4JFU0	GH10448.	GH19391.	0.671
DgriGH10448	DgriGH19392	B4K1P7	B4JFU1	GH10448.	GH19392.	0.662
DgriGH10448	DgriGH19396	B4K1P7	B4JFV0	GH10448.	GH19396.	0.652
DgriGH10460	DgriGH10448	B4K1P6	B4K1P7	GH10460.	GH10448.	0.654
DgriGH10460	DgriGH18200	B4K1P6	B4JFV1	GH10460.	GH18200.	0.652
DgriGH10460	DgriGH19388	B4K1P6	B4JFT7	GH10460.	GH19388.	0.658
DgriGH10460	DgriGH19389	B4K1P6	B4JFT8	GH10460.	GH19389.	0.658
DgriGH10460	DgriGH19390	B4K1P6	B4JFT9	GH10460.	GH19390.	0.661
DgriGH10460	DgriGH19391	B4K1P6	B4JFU0	GH10460.	GH19391.	0.701
DgriGH10460	DgriGH19392	B4K1P6	B4JFU1	GH10460.	GH19392.	0.661
DgriGH10460	DgriGH19396	B4K1P6	B4JFV0	GH10460.	GH19396.	0.652
DgriGH10587	DgriGH12684	B4JD97	B4JKK7	GH10587; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Serine--pyruvate aminotransferase.	0.983
DgriGH10587	DgriGH14768	B4JD97	B4J3Q3	GH10587; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	GH14768; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.851
DgriGH10587	DgriGH16754	B4JD97	B4J3N2	GH10587; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	GH16754.	0.641
DgriGH10587	DgriGH17621	B4JD97	B4JSR8	GH10587; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	GH17621.	0.422