36 items (Drosophila grimshawi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DgriGH24751	GH24751. (508 aa)
	DgriGH14741	GH14741. (1115 aa)
	DgriGH15170	GH15170. (506 aa)
	DgriGH14639	GH14639. (733 aa)
	DgriGH14627	GH14627. (708 aa)
	DgriGH14989	GH14989. (1047 aa)
	DgriGH14991	GH14991. (120 aa)
	DgriGH15493	GH15493. (437 aa)
	DgriGH20958	GH20958; Belongs to the helicase family. Dicer subfamily. (1713 aa)
	DgriGH21536	GH21536. (392 aa)
	DgriGH20673	GH20673. (300 aa)
	DgriGH20561	GH20561. (311 aa)
	DgriGH21946	GH21946. (126 aa)
	DgriGH20490	GH20490. (1658 aa)
	DgriGH10357	GH10357. (317 aa)
	DgriGH10137	GH10137. (221 aa)
	DgriGH10136	GH10136. (228 aa)
	DgriGH10637	GH10637. (249 aa)
	DgriGH10622	Glucose-6-phosphate 1-epimerase; Belongs to the glucose-6-phosphate 1-epimerase family. (272 aa)
	DgriGH11116	GH11116. (1595 aa)
	DgriGH19240	GH19240. (911 aa)
	DgriGH18237	GH18237. (974 aa)
	DgriGH18811	GH18811; Belongs to the RNR ribonuclease family. (979 aa)
	DgriGH18841	GH18841. (737 aa)
	DgriGH18995	GH18995. (1053 aa)
	DgriGH18528	GH18528. (360 aa)
	DgriGH12194	GH12194. (361 aa)
	DgriGH12542	GH12542. (1226 aa)
	DgriGH12793	GH12793; Belongs to the protein kinase superfamily. (398 aa)
	DgriGH24281	GH24281. (602 aa)
	DgriGH13429	GH13429. (1067 aa)
	DgriGH13352	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (378 aa)
	DgriGH23021	GH23021; Belongs to the Toll-like receptor family. (1486 aa)
	DgriGH23027	GH23027; Belongs to the Toll-like receptor family. (1419 aa)
	DgriGH17919	GH17919. (164 aa)
	DgriGH14304	Phospholipase A(2). (310 aa)

Your Current Organism:

Drosophila grimshawi

NCBI taxonomy Id: 7222
Other names: D. grimshawi, Idiomyia grimshawi

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DgriGH10136	DgriGH17919	B4JCC6	B4JXC1	GH10136.	GH17919.	0.457
DgriGH10357	DgriGH14741	B4JA31	B4IWV1	GH10357.	GH14741.	0.778
DgriGH10357	DgriGH20958	B4JA31	B4J4B1	GH10357.	GH20958; Belongs to the helicase family. Dicer subfamily.	0.984
DgriGH10637	DgriGH13429	B4JCT4	B4JPC7	GH10637.	GH13429.	0.990
DgriGH10637	DgriGH18811	B4JCT4	B4JFX3	GH10637.	GH18811; Belongs to the RNR ribonuclease family.	0.979
DgriGH10637	DgriGH19240	B4JCT4	B4JF39	GH10637.	GH19240.	0.998
DgriGH10637	DgriGH20673	B4JCT4	B4J751	GH10637.	GH20673.	0.999
DgriGH11116	DgriGH12542	B4JCX2	B4JJT9	GH11116.	GH12542.	0.523
DgriGH11116	DgriGH12793	B4JCX2	B4JL63	GH11116.	GH12793; Belongs to the protein kinase superfamily.	0.587
DgriGH11116	DgriGH18995	B4JCX2	B4JHV4	GH11116.	GH18995.	0.483
DgriGH12194	DgriGH15170	B4JJS2	B4IXW1	GH12194.	GH15170.	0.933
DgriGH12542	DgriGH11116	B4JJT9	B4JCX2	GH12542.	GH11116.	0.523
DgriGH12542	DgriGH12793	B4JJT9	B4JL63	GH12542.	GH12793; Belongs to the protein kinase superfamily.	0.647
DgriGH12542	DgriGH18841	B4JJT9	B4JGA4	GH12542.	GH18841.	0.536
DgriGH12542	DgriGH18995	B4JJT9	B4JHV4	GH12542.	GH18995.	0.566
DgriGH12793	DgriGH11116	B4JL63	B4JCX2	GH12793; Belongs to the protein kinase superfamily.	GH11116.	0.587
DgriGH12793	DgriGH12542	B4JL63	B4JJT9	GH12793; Belongs to the protein kinase superfamily.	GH12542.	0.647
DgriGH12793	DgriGH13352	B4JL63	B4JPQ6	GH12793; Belongs to the protein kinase superfamily.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.981
DgriGH12793	DgriGH18841	B4JL63	B4JGA4	GH12793; Belongs to the protein kinase superfamily.	GH18841.	0.514
DgriGH12793	DgriGH18995	B4JL63	B4JHV4	GH12793; Belongs to the protein kinase superfamily.	GH18995.	0.982