(37 nodes) Cytosolic small ribosomal subunit network (Drosophila grimshawi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DgriGH15894	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (132 aa)
	DgriGH23036	GH23036; Belongs to the universal ribosomal protein uS13 family. (162 aa)
	DgriGH22980	GH22980; Belongs to the universal ribosomal protein uS17 family. (196 aa)
	DgriGH14648	GH14648; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	DgriGH17341	GH17341; Belongs to the universal ribosomal protein uS11 family. (151 aa)
	DgriGH15938	GH15938. (120 aa)
	DgriGH20000	GH20000; Belongs to the universal ribosomal protein uS3 family. (246 aa)
	DgriGH13542	GH13542. (156 aa)
	DgriGH24178	GH24178; Belongs to the universal ribosomal protein uS11 family. (151 aa)
	DgriGH24635	GH24635; Belongs to the universal ribosomal protein uS7 family. (228 aa)
	DgriGH24937	GH24937. (160 aa)
	DgriGH24620	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (248 aa)
	DgriGH24437	GH24437; Belongs to the universal ribosomal protein uS11 family. (151 aa)
	DgriGH12611	GH12611. (156 aa)
	DgriGH12901	GH12901. (65 aa)
	DgriGH17143	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (261 aa)
	DgriGH20334	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (132 aa)
	DgriGH15146	GH15146; Belongs to the universal ribosomal protein uS4 family. (195 aa)
	DgriGH16319	GH16319. (132 aa)
	DgriGH17537	GH17537. (278 aa)
	DgriGH23307	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (139 aa)
	RpS3A	40S ribosomal protein S3a; Essential for oogenesis; required for late follicle cell development. (268 aa)
	DgriGH14312	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (208 aa)
	sta	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Required during oogenesis and imaginal development. (272 aa)
	DgriGH17815	GH17815; Belongs to the universal ribosomal protein uS8 family. (130 aa)
	DgriGH20641	GH20641; Belongs to the universal ribosomal protein uS19 family. (148 aa)
	DgriGH20043	GH20043; Belongs to the universal ribosomal protein uS12 family. (143 aa)
	DgriGH20474	GH20474; Belongs to the universal ribosomal protein uS9 family. (148 aa)
	DgriGH10885	GH10885; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	DgriGH10536	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)
	DgriGH11289	GH11289. (164 aa)
	DgriGH10453	GH10453. (164 aa)
	DgriGH10440	GH10440; Belongs to the universal ribosomal protein uS5 family. (268 aa)
	DgriGH18420	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (194 aa)
	DgriGH19325	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (117 aa)
	DgriGH19510	40S ribosomal protein S27. (84 aa)
	DgriGH19518	GH19518; Belongs to the universal ribosomal protein uS7 family. (242 aa)

Your Current Organism:

Drosophila grimshawi

NCBI taxonomy Id: 7222
Other names: D. grimshawi, Idiomyia grimshawi

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DgriGH10440	DgriGH10453	B4JE34	B4JE13	GH10440; Belongs to the universal ribosomal protein uS5 family.	GH10453.	0.979
DgriGH10440	DgriGH10536	B4JE34	B4JDL2	GH10440; Belongs to the universal ribosomal protein uS5 family.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.999
DgriGH10440	DgriGH10885	B4JE34	B4JAL1	GH10440; Belongs to the universal ribosomal protein uS5 family.	GH10885; Belongs to the universal ribosomal protein uS15 family.	0.996
DgriGH10440	DgriGH11289	B4JE34	B4JE12	GH10440; Belongs to the universal ribosomal protein uS5 family.	GH11289.	0.979
DgriGH10440	DgriGH12611	B4JE34	B4JK84	GH10440; Belongs to the universal ribosomal protein uS5 family.	GH12611.	0.999
DgriGH10440	DgriGH12901	B4JE34	B4JIP9	GH10440; Belongs to the universal ribosomal protein uS5 family.	GH12901.	0.999
DgriGH10440	DgriGH13542	B4JE34	B4JPL3	GH10440; Belongs to the universal ribosomal protein uS5 family.	GH13542.	0.999
DgriGH10440	DgriGH14312	B4JE34	B4JYK9	GH10440; Belongs to the universal ribosomal protein uS5 family.	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	0.999
DgriGH10440	DgriGH14648	B4JE34	B4JV05	GH10440; Belongs to the universal ribosomal protein uS5 family.	GH14648; Belongs to the universal ribosomal protein uS15 family.	0.996
DgriGH10440	DgriGH15146	B4JE34	B4IY80	GH10440; Belongs to the universal ribosomal protein uS5 family.	GH15146; Belongs to the universal ribosomal protein uS4 family.	0.999
DgriGH10440	DgriGH15894	B4JE34	B4JUF4	GH10440; Belongs to the universal ribosomal protein uS5 family.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
DgriGH10440	DgriGH15938	B4JE34	B4JUE3	GH10440; Belongs to the universal ribosomal protein uS5 family.	GH15938.	0.999
DgriGH10440	DgriGH16319	B4JE34	B4IYA4	GH10440; Belongs to the universal ribosomal protein uS5 family.	GH16319.	0.999
DgriGH10440	DgriGH17143	B4JE34	B4J0S0	GH10440; Belongs to the universal ribosomal protein uS5 family.	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	0.999
DgriGH10440	DgriGH17341	B4JE34	B4JUT2	GH10440; Belongs to the universal ribosomal protein uS5 family.	GH17341; Belongs to the universal ribosomal protein uS11 family.	0.989
DgriGH10440	DgriGH17537	B4JE34	B4K083	GH10440; Belongs to the universal ribosomal protein uS5 family.	GH17537.	0.979
DgriGH10440	DgriGH17815	B4JE34	B4JWT1	GH10440; Belongs to the universal ribosomal protein uS5 family.	GH17815; Belongs to the universal ribosomal protein uS8 family.	0.996
DgriGH10440	DgriGH18420	B4JE34	B4JEN0	GH10440; Belongs to the universal ribosomal protein uS5 family.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.999
DgriGH10440	DgriGH19325	B4JE34	B4JFI2	GH10440; Belongs to the universal ribosomal protein uS5 family.	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.	0.999
DgriGH10440	DgriGH19510	B4JE34	B4JGZ0	GH10440; Belongs to the universal ribosomal protein uS5 family.	40S ribosomal protein S27.	0.999