22 items (Drosophila grimshawi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DgriGH15905	GH15905. (596 aa)
	DgriGH16907	GH16907. (2013 aa)
	DgriGH16260	Non-specific serine/threonine protein kinase. (1242 aa)
	DgriGH16949	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (425 aa)
	DgriGH15553	GH15553. (300 aa)
	DgriGH22153	GH22153. (1069 aa)
	DgriGH20990	GH20990. (141 aa)
	DgriGH10837	GH10837. (659 aa)
	DgriGH10208	Serine/threonine-protein phosphatase. (309 aa)
	DgriGH11110	Mitogen-activated protein kinase. (361 aa)
	DgriGH19092	Mitogen-activated protein kinase. (366 aa)
	DgriGH11922	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (937 aa)
	DgriGH24341	GH24341. (284 aa)
	DgriGH24340	GH24340. (378 aa)
	DgriGH24339	GH24339. (252 aa)
	DgriGH24728	Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (206 aa)
	DgriGH24824	GH24824; Belongs to the protein kinase superfamily. (354 aa)
	DgriGH24077	GH24077. (784 aa)
	DgriGH13352	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (378 aa)
	DgriGH15079	GH15079. (1205 aa)
	DgriGH17726	GH17726. (376 aa)
	DgriGH12630	GH12630. (385 aa)

Your Current Organism:

Drosophila grimshawi

NCBI taxonomy Id: 7222
Other names: D. grimshawi, Idiomyia grimshawi

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DgriGH10208	DgriGH10837	B4JBI4	B4JAK9	Serine/threonine-protein phosphatase.	GH10837.	0.999
DgriGH10208	DgriGH11110	B4JBI4	B4JCW4	Serine/threonine-protein phosphatase.	Mitogen-activated protein kinase.	0.549
DgriGH10208	DgriGH11922	B4JBI4	B4JL67	Serine/threonine-protein phosphatase.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.549
DgriGH10208	DgriGH19092	B4JBI4	B4JIF9	Serine/threonine-protein phosphatase.	Mitogen-activated protein kinase.	0.549
DgriGH10837	DgriGH10208	B4JAK9	B4JBI4	GH10837.	Serine/threonine-protein phosphatase.	0.999
DgriGH10837	DgriGH11110	B4JAK9	B4JCW4	GH10837.	Mitogen-activated protein kinase.	0.518
DgriGH10837	DgriGH11922	B4JAK9	B4JL67	GH10837.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.518
DgriGH10837	DgriGH19092	B4JAK9	B4JIF9	GH10837.	Mitogen-activated protein kinase.	0.518
DgriGH11110	DgriGH10208	B4JCW4	B4JBI4	Mitogen-activated protein kinase.	Serine/threonine-protein phosphatase.	0.549
DgriGH11110	DgriGH10837	B4JCW4	B4JAK9	Mitogen-activated protein kinase.	GH10837.	0.518
DgriGH11110	DgriGH12630	B4JCW4	B4K2F9	Mitogen-activated protein kinase.	GH12630.	0.756
DgriGH11110	DgriGH13352	B4JCW4	B4JPQ6	Mitogen-activated protein kinase.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.409
DgriGH11110	DgriGH16260	B4JCW4	B4IXU1	Mitogen-activated protein kinase.	Non-specific serine/threonine protein kinase.	0.690
DgriGH11110	DgriGH16949	B4JCW4	B4IY47	Mitogen-activated protein kinase.	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.756
DgriGH11110	DgriGH19092	B4JCW4	B4JIF9	Mitogen-activated protein kinase.	Mitogen-activated protein kinase.	0.951
DgriGH11110	DgriGH24077	B4JCW4	B4JNV2	Mitogen-activated protein kinase.	GH24077.	0.778
DgriGH11110	DgriGH24728	B4JCW4	B4JN12	Mitogen-activated protein kinase.	Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.686
DgriGH11110	DgriGH24824	B4JCW4	B4JNI1	Mitogen-activated protein kinase.	GH24824; Belongs to the protein kinase superfamily.	0.950
DgriGH11922	DgriGH10208	B4JL67	B4JBI4	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Serine/threonine-protein phosphatase.	0.549
DgriGH11922	DgriGH10837	B4JL67	B4JAK9	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	GH10837.	0.518