18 items (Drosophila grimshawi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DgriGH14641	GH14641. (415 aa)
	DgriGH16904	GH16904. (331 aa)
	DgriGH20977	5'-nucleotidase; Belongs to the pyrimidine 5'-nucleotidase family. (320 aa)
	DgriGH20673	GH20673. (300 aa)
	DgriGH15038	GH15038. (678 aa)
	DgriGH22060	GH22060. (296 aa)
	DgriGH10967	GH10967. (214 aa)
	DgriGH10637	GH10637. (249 aa)
	DgriGH18811	GH18811; Belongs to the RNR ribonuclease family. (979 aa)
	DgriGH15630	GH15630; Belongs to the RNR ribonuclease family. (1109 aa)
	DgriGH15753	GH15753. (340 aa)
	DgriGH16899	GH16899. (1713 aa)
	DgriGH22558	GH22558. (336 aa)
	DgriGH11203	GH11203. (1194 aa)
	DgriGH25200	GH25200. (232 aa)
	DgriGH20601	GH20601. (1227 aa)
	DgriGH18468	GH18468. (235 aa)
	DgriGH19441	GH19441. (380 aa)

Your Current Organism:

Drosophila grimshawi

NCBI taxonomy Id: 7222
Other names: D. grimshawi, Idiomyia grimshawi

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DgriGH10637	DgriGH10967	B4JCT4	B4JBD7	GH10637.	GH10967.	0.999
DgriGH10637	DgriGH11203	B4JCT4	B4JTA0	GH10637.	GH11203.	0.942
DgriGH10637	DgriGH14641	B4JCT4	B4IXZ8	GH10637.	GH14641.	0.998
DgriGH10637	DgriGH15038	B4JCT4	B4IZY0	GH10637.	GH15038.	0.976
DgriGH10637	DgriGH15630	B4JCT4	B4J099	GH10637.	GH15630; Belongs to the RNR ribonuclease family.	0.966
DgriGH10637	DgriGH15753	B4JCT4	B4IYL2	GH10637.	GH15753.	0.724
DgriGH10637	DgriGH16899	B4JCT4	B4IXM5	GH10637.	GH16899.	0.973
DgriGH10637	DgriGH16904	B4JCT4	B4IXN7	GH10637.	GH16904.	0.998
DgriGH10637	DgriGH18468	B4JCT4	B4JIK0	GH10637.	GH18468.	0.999
DgriGH10637	DgriGH18811	B4JCT4	B4JFX3	GH10637.	GH18811; Belongs to the RNR ribonuclease family.	0.979
DgriGH10637	DgriGH20601	B4JCT4	B4J7V9	GH10637.	GH20601.	0.872
DgriGH10637	DgriGH20673	B4JCT4	B4J751	GH10637.	GH20673.	0.999
DgriGH10637	DgriGH22060	B4JCT4	B4J9X0	GH10637.	GH22060.	0.999
DgriGH10637	DgriGH22558	B4JCT4	B4JSK8	GH10637.	GH22558.	0.724
DgriGH10637	DgriGH25200	B4JCT4	B4JZ82	GH10637.	GH25200.	0.752
DgriGH10967	DgriGH10637	B4JBD7	B4JCT4	GH10967.	GH10637.	0.999
DgriGH10967	DgriGH11203	B4JBD7	B4JTA0	GH10967.	GH11203.	0.964
DgriGH10967	DgriGH14641	B4JBD7	B4IXZ8	GH10967.	GH14641.	0.998
DgriGH10967	DgriGH15038	B4JBD7	B4IZY0	GH10967.	GH15038.	0.983
DgriGH10967	DgriGH15630	B4JBD7	B4J099	GH10967.	GH15630; Belongs to the RNR ribonuclease family.	0.972