75 items (Drosophila grimshawi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DgriGH20225	GH20225. (468 aa)
	DgriGH20836	GH20836. (735 aa)
	DgriGH20864	GH20864. (621 aa)
	DgriGH14818	GH14818. (1126 aa)
	DgriGH16006	GH16006. (192 aa)
	DgriGH16613	GH16613. (192 aa)
	DgriGH18044	GH18044. (940 aa)
	DgriGH19583	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (213 aa)
	DgriGH19047	GH19047. (1025 aa)
	DgriGH14899	GH14899. (1957 aa)
	DgriGH15523	GH15523. (190 aa)
	DgriGH14384	GH14384. (187 aa)
	DgriGH16466	GH16466. (1092 aa)
	DgriGH16464	GH16464. (2078 aa)
	DgriGH16452	GH16452. (1676 aa)
	DgriGH15671	GH15671. (2316 aa)
	DgriGH19096	GH19096. (690 aa)
	DgriGH18481	GH18481. (207 aa)
	DgriGH17059	GH17059. (201 aa)
	DgriGH12491	GH12491. (191 aa)
	DgriGH12612	Non-specific serine/threonine protein kinase. (645 aa)
	DgriGH12683	GH12683. (1484 aa)
	DgriGH24527	GH24527. (1545 aa)
	DgriGH24224	GH24224. (358 aa)
	DgriGH24747	GH24747. (1662 aa)
	DgriGH24777	GH24777. (1089 aa)
	DgriGH24161	Integrin beta; Belongs to the integrin beta chain family. (895 aa)
	DgriGH24809	GH24809. (1535 aa)
	DgriGH24103	GH24103; Belongs to the MAGUK family. (997 aa)
	DgriGH13200	GH13200; Belongs to the DOCK family. (204 aa)
	DgriGH13199	GH13199; Belongs to the DOCK family. (2077 aa)
	DgriGH13043	GH13043. (1901 aa)
	DgriGH21317	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (1420 aa)
	DgriGH19133	Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. (1291 aa)
	DgriGH17981	GH17981. (1780 aa)
	DgriGH16728	GH16728. (775 aa)
	DgriGH23808	GH23808. (943 aa)
	DgriGH13772	GH13772. (1871 aa)
	DgriGH14348	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (211 aa)
	DgriGH23114	GH23114. (340 aa)
	DgriGH23057	GH23057. (1142 aa)
	DgriGH17797	GH17797. (812 aa)
	DgriGH17579	GH17579. (504 aa)
	DgriGH14295	GH14295. (1726 aa)
	DgriGH23981	GH23981. (654 aa)
	DgriGH23982	GH23982. (265 aa)
	DgriGH23930	GH23930. (1041 aa)
	DgriGH19698	GH19698. (460 aa)
	DgriGH24972	GH24972. (152 aa)
	DgriGH23890	GH23890; Belongs to the DOCK family. (172 aa)
	DgriGH11734	GH11734. (254 aa)
	DgriGH23371	GH23371. (221 aa)
	DgriGH23601	GH23601. (236 aa)
	DgriGH19637	GH19637. (84 aa)
	DgriGH14564	GH14564. (718 aa)
	DgriGH16932	GH16932. (1099 aa)
	DgriGH16152	GH16152. (466 aa)
	DgriGH21953	GH21953. (242 aa)
	DgriGH10826	GH10826. (380 aa)
	DgriGH10825	GH10825. (432 aa)
	DgriGH10763	GH10763. (692 aa)
	DgriGH11549	GH11549. (325 aa)
	DgriGH11618	GH11618. (1094 aa)
	DgriGH18301	GH18301. (355 aa)
	DgriGH19297	GH19297. (434 aa)
	DgriGH19306	GH19306. (1401 aa)
	DgriGH18242	GH18242; Belongs to the protein kinase superfamily. (401 aa)
	DgriGH18162	GH18162. (503 aa)
	DgriGH18163	GH18163. (293 aa)
	DgriGH18844	GH18844. (803 aa)
	DgriGH20603	Vang-like protein. (589 aa)
	DgriGH20619	GH20619. (698 aa)
	DgriGH20114	GH20114. (126 aa)
	DgriGH20169	GH20169. (76 aa)
	DgriGH21715	GH21715. (668 aa)

Your Current Organism:

Drosophila grimshawi

NCBI taxonomy Id: 7222
Other names: D. grimshawi, Idiomyia grimshawi

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DgriGH10763	DgriGH11549	B4JBD9	B4JBG9	GH10763.	GH11549.	0.400
DgriGH10763	DgriGH11618	B4JBD9	B4JC08	GH10763.	GH11618.	0.687
DgriGH10763	DgriGH11734	B4JBD9	B4K1T9	GH10763.	GH11734.	0.451
DgriGH10763	DgriGH12491	B4JBD9	B4JJH5	GH10763.	GH12491.	0.580
DgriGH10763	DgriGH12612	B4JBD9	B4JK86	GH10763.	Non-specific serine/threonine protein kinase.	0.415
DgriGH10763	DgriGH14818	B4JBD9	B4J304	GH10763.	GH14818.	0.987
DgriGH10763	DgriGH16006	B4JBD9	B4J2E5	GH10763.	GH16006.	0.580
DgriGH10763	DgriGH16452	B4JBD9	B4J010	GH10763.	GH16452.	0.630
DgriGH10763	DgriGH16613	B4JBD9	B4J295	GH10763.	GH16613.	0.580
DgriGH10763	DgriGH16932	B4JBD9	B4IY08	GH10763.	GH16932.	0.848
DgriGH10763	DgriGH17797	B4JBD9	B4JWP8	GH10763.	GH17797.	0.582
DgriGH10763	DgriGH18242	B4JBD9	B4JFL6	GH10763.	GH18242; Belongs to the protein kinase superfamily.	0.437
DgriGH10763	DgriGH19133	B4JBD9	B4JS07	GH10763.	Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.	0.982
DgriGH10763	DgriGH19698	B4JBD9	B4K012	GH10763.	GH19698.	0.981
DgriGH10763	DgriGH20169	B4JBD9	B4J6E3	GH10763.	GH20169.	0.981
DgriGH10763	DgriGH20619	B4JBD9	B4J7S4	GH10763.	GH20619.	0.451
DgriGH10763	DgriGH21953	B4JBD9	B4J8S3	GH10763.	GH21953.	0.516
DgriGH10763	DgriGH23930	B4JBD9	B4JZV4	GH10763.	GH23930.	0.459
DgriGH10763	DgriGH24103	B4JBD9	B4JNP3	GH10763.	GH24103; Belongs to the MAGUK family.	0.516
DgriGH10763	DgriGH24161	B4JBD9	B4JNC9	GH10763.	Integrin beta; Belongs to the integrin beta chain family.	0.477