71 items (Drosophila grimshawi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DgriGH25105	GH25105. (187 aa)
	DgriGH25039	GH25039. (59 aa)
	DgriGH23535	GH23535. (152 aa)
	DgriGH23742	GH23742. (152 aa)
	DgriGH22500	GH22500. (187 aa)
	DgriGH23254	GH23254. (269 aa)
	DgriGH23754	GH23754. (187 aa)
	DgriGH23753	GH23753. (187 aa)
	DgriGH22438	GH22438. (187 aa)
	DgriGH25116	GH25116. (348 aa)
	DgriGH25127	GH25127. (348 aa)
	DgriGH23273	GH23273. (348 aa)
	DgriGH22572	GH22572. (151 aa)
	DgriGH24814	GH24814. (163 aa)
	DgriGH24825	GH24825. (348 aa)
	DgriGH23558	GH23558. (152 aa)
	DgriGH25218	GH25218. (152 aa)
	DgriGH23884	GH23884. (152 aa)
	DgriGH22219	GH22219. (1247 aa)
	DgriGH11646	GH11646. (152 aa)
	DgriGH22297	GH22297. (2369 aa)
	DgriGH22298	GH22298. (1700 aa)
	DgriGH14295	GH14295. (1726 aa)
	DgriGH17579	GH17579. (504 aa)
	DgriGH23086	GH23086; Belongs to the actin family. (379 aa)
	DgriGH23057	GH23057. (1142 aa)
	DgriGH14348	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (211 aa)
	DgriGH13772	GH13772. (1871 aa)
	DgriGH23808	GH23808. (943 aa)
	DgriGH23060	GH23060. (4831 aa)
	DgriGH13043	GH13043. (1901 aa)
	DgriGH13153	Anion exchange protein. (1159 aa)
	DgriGH24809	GH24809. (1535 aa)
	DgriGH24372	GH24372. (376 aa)
	DgriGH24410	GH24410. (921 aa)
	DgriGH24488	GH24488. (689 aa)
	DgriGH12570	GH12570. (199 aa)
	DgriGH12462	GH12462. (851 aa)
	DgriGH18481	GH18481. (207 aa)
	DgriGH19077	GH19077. (376 aa)
	DgriGH19047	GH19047. (1025 aa)
	DgriGH19045	GH19045. (376 aa)
	DgriGH19583	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (213 aa)
	DgriGH18044	GH18044. (940 aa)
	DgriGH18163	GH18163. (293 aa)
	DgriGH18162	GH18162. (503 aa)
	DgriGH18195	GH18195. (855 aa)
	DgriGH19306	GH19306. (1401 aa)
	DgriGH10708	GH10708. (613 aa)
	DgriGH11618	GH11618. (1094 aa)
	DgriGH11549	GH11549. (325 aa)
	DgriGH10825	GH10825. (432 aa)
	DgriGH10826	GH10826. (380 aa)
	DgriGH10295	GH10295; Belongs to the intermediate filament family. (625 aa)
	DgriGH11421	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. (276 aa)
	DgriGH22067	GH22067. (192 aa)
	DgriGH20408	GH20408. (376 aa)
	DgriGH22007	GH22007. (376 aa)
	DgriGH20603	Vang-like protein. (589 aa)
	DgriGH21848	GH21848. (147 aa)
	DgriGH20071	GH20071. (1217 aa)
	DgriGH20114	GH20114. (126 aa)
	DgriGH21120	GH21120; Belongs to the intermediate filament family. (623 aa)
	DgriGH20836	GH20836. (735 aa)
	DgriGH15523	GH15523. (190 aa)
	DgriGH14437	GH14437. (376 aa)
	DgriGH16932	GH16932. (1099 aa)
	DgriGH16916	GH16916. (333 aa)
	DgriGH16838	GH16838. (311 aa)
	DgriGH16837	GH16837. (298 aa)
	DgriGH16152	GH16152. (466 aa)

Your Current Organism:

Drosophila grimshawi

NCBI taxonomy Id: 7222
Other names: D. grimshawi, Idiomyia grimshawi

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DgriGH10295	DgriGH10708	B4JAF2	B4JC31	GH10295; Belongs to the intermediate filament family.	GH10708.	0.478
DgriGH10295	DgriGH11421	B4JAF2	B4JAA5	GH10295; Belongs to the intermediate filament family.	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.439
DgriGH10295	DgriGH11618	B4JAF2	B4JC08	GH10295; Belongs to the intermediate filament family.	GH11618.	0.441
DgriGH10295	DgriGH16916	B4JAF2	B4IXQ7	GH10295; Belongs to the intermediate filament family.	GH16916.	0.504
DgriGH10295	DgriGH16932	B4JAF2	B4IY08	GH10295; Belongs to the intermediate filament family.	GH16932.	0.427
DgriGH10295	DgriGH18195	B4JAF2	B4JG26	GH10295; Belongs to the intermediate filament family.	GH18195.	0.442
DgriGH10295	DgriGH19306	B4JAF2	B4JFF0	GH10295; Belongs to the intermediate filament family.	GH19306.	0.535
DgriGH10295	DgriGH21120	B4JAF2	B4J687	GH10295; Belongs to the intermediate filament family.	GH21120; Belongs to the intermediate filament family.	0.917
DgriGH10295	DgriGH21848	B4JAF2	B4J7M5	GH10295; Belongs to the intermediate filament family.	GH21848.	0.511
DgriGH10295	DgriGH22067	B4JAF2	B4J9Y1	GH10295; Belongs to the intermediate filament family.	GH22067.	0.515
DgriGH10295	DgriGH24410	B4JAF2	B4JM22	GH10295; Belongs to the intermediate filament family.	GH24410.	0.461
DgriGH10708	DgriGH10295	B4JC31	B4JAF2	GH10708.	GH10295; Belongs to the intermediate filament family.	0.478
DgriGH10708	DgriGH11421	B4JC31	B4JAA5	GH10708.	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.553
DgriGH10708	DgriGH11549	B4JC31	B4JBG9	GH10708.	GH11549.	0.900
DgriGH10708	DgriGH11618	B4JC31	B4JC08	GH10708.	GH11618.	0.488
DgriGH10708	DgriGH18195	B4JC31	B4JG26	GH10708.	GH18195.	0.472
DgriGH10708	DgriGH19306	B4JC31	B4JFF0	GH10708.	GH19306.	0.484
DgriGH10708	DgriGH21120	B4JC31	B4J687	GH10708.	GH21120; Belongs to the intermediate filament family.	0.478
DgriGH10708	DgriGH24410	B4JC31	B4JM22	GH10708.	GH24410.	0.548
DgriGH10825	DgriGH10826	B4JAV8	B4JAV3	GH10825.	GH10826.	0.616