23 items (Drosophila grimshawi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DgriGH13991	GH13991. (157 aa)
	DgriGH14624	GH14624. (157 aa)
	DgriGH15401	GH15401. (110 aa)
	DgriGH20839	GH20839. (122 aa)
	DgriGH19983	GH19983. (144 aa)
	DgriGH10975	GH10975. (143 aa)
	DgriGH19282	GH19282. (174 aa)
	DgriGH18907	GH18907. (149 aa)
	DgriGH18683	GH18683. (151 aa)
	DgriGH22762	GH22762. (137 aa)
	DgriGH23015	GH23015. (138 aa)
	DgriGH23016	GH23016. (135 aa)
	DgriGH22760	GH22760. (132 aa)
	DgriGH23017	GH23017. (132 aa)
	DgriGH23020	GH23020. (135 aa)
	DgriGH17928	GH17928. (123 aa)
	DgriGH17929	GH17929. (161 aa)
	DgriGH17930	GH17930. (148 aa)
	DgriGH14285	GH14285. (149 aa)
	DgriGH14286	GH14286. (226 aa)
	DgriGH14012	GH14012. (244 aa)
	DgriGH14291	GH14291. (125 aa)
	DgriGH14293	GH14293. (157 aa)

Your Current Organism:

Drosophila grimshawi

NCBI taxonomy Id: 7222
Other names: D. grimshawi, Idiomyia grimshawi

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same PNG format, but at higher resolution

... as a vector graphic:

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DgriGH10975	DgriGH15401	B4JBL9	B4J333	GH10975.	GH15401.	0.507
DgriGH10975	DgriGH17928	B4JBL9	B4JXD1	GH10975.	GH17928.	0.588
DgriGH10975	DgriGH19282	B4JBL9	B4JFA9	GH10975.	GH19282.	0.535
DgriGH14285	DgriGH14286	B4JYG7	B4JYG8	GH14285.	GH14286.	0.457
DgriGH14286	DgriGH14285	B4JYG8	B4JYG7	GH14286.	GH14285.	0.457
DgriGH15401	DgriGH10975	B4J333	B4JBL9	GH15401.	GH10975.	0.507
DgriGH15401	DgriGH17928	B4J333	B4JXD1	GH15401.	GH17928.	0.856
DgriGH15401	DgriGH17930	B4J333	B4JXD4	GH15401.	GH17930.	0.476
DgriGH15401	DgriGH19282	B4J333	B4JFA9	GH15401.	GH19282.	0.676
DgriGH17928	DgriGH10975	B4JXD1	B4JBL9	GH17928.	GH10975.	0.588
DgriGH17928	DgriGH15401	B4JXD1	B4J333	GH17928.	GH15401.	0.856
DgriGH17928	DgriGH17929	B4JXD1	B4JXD2	GH17928.	GH17929.	0.410
DgriGH17928	DgriGH17930	B4JXD1	B4JXD4	GH17928.	GH17930.	0.498
DgriGH17928	DgriGH19282	B4JXD1	B4JFA9	GH17928.	GH19282.	0.697
DgriGH17929	DgriGH17928	B4JXD2	B4JXD1	GH17929.	GH17928.	0.410
DgriGH17929	DgriGH17930	B4JXD2	B4JXD4	GH17929.	GH17930.	0.507
DgriGH17930	DgriGH15401	B4JXD4	B4J333	GH17930.	GH15401.	0.476
DgriGH17930	DgriGH17928	B4JXD4	B4JXD1	GH17930.	GH17928.	0.498
DgriGH17930	DgriGH17929	B4JXD4	B4JXD2	GH17930.	GH17929.	0.507
DgriGH19282	DgriGH10975	B4JFA9	B4JBL9	GH19282.	GH10975.	0.535