Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CG12674 | CG3909 | FBpp0077500 | FBpp0081650 | IP09436p; Chromatin binding; RNA polymerase II complex binding. It is involved in the biological process described with: transcription elongation from RNA polymerase II promoter; histone modification. | WD_REPEATS_REGION domain-containing protein. | 0.752 |
| CG12674 | CG6220 | FBpp0077500 | FBpp0086776 | IP09436p; Chromatin binding; RNA polymerase II complex binding. It is involved in the biological process described with: transcription elongation from RNA polymerase II promoter; histone modification. | FI06213p; RNA polymerase II complex binding. It is involved in the biological process described with: positive regulation of transcription elongation from RNA polymerase II promoter; recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex; histone modification; negative regulation of transcription by RNA polymerase II. | 0.926 |
| CG12674 | CG9899 | FBpp0077500 | FBpp0071879 | IP09436p; Chromatin binding; RNA polymerase II complex binding. It is involved in the biological process described with: transcription elongation from RNA polymerase II promoter; histone modification. | TPR_REGION domain-containing protein; RNA polymerase II complex binding; SH2 domain binding. It is involved in the biological process described with: positive regulation of transcription by RNA polymerase II; regulation of transcription, DNA-templated; regulation of histone H3-K4 methylation. | 0.864 |
| CG12674 | Ctr9 | FBpp0077500 | FBpp0072561 | IP09436p; Chromatin binding; RNA polymerase II complex binding. It is involved in the biological process described with: transcription elongation from RNA polymerase II promoter; histone modification. | Ctr9, isoform A; Ctr9 (Ctr9) encodes a highly conserved member of the polymerase-associated factor 1 complex, which controls a number of transcriptional and epigenetic processes. It is involved in the proliferation and terminal differentiation of the central nervous system. | 0.879 |
| CG12674 | Rtf1 | FBpp0077500 | FBpp0309752 | IP09436p; Chromatin binding; RNA polymerase II complex binding. It is involved in the biological process described with: transcription elongation from RNA polymerase II promoter; histone modification. | RNA polymerase-associated protein Rtf1; Plays a role in transcription-coupled histone modification. Required for methylation of 'Lys-4' of histone H3. Plays a role in regulation of transcription. Required for maximal induction of heat- shock genes. Plays a role in Notch signaling in the wing margins. | 0.819 |
| CG12674 | atms | FBpp0077500 | FBpp0306920 | IP09436p; Chromatin binding; RNA polymerase II complex binding. It is involved in the biological process described with: transcription elongation from RNA polymerase II promoter; histone modification. | Antimeros, isoform A; Antimeros (atms) encodes a component of the PAF1 complex (together with the products of Atu, hyx, Rtf1 and Ctr9). The PAF1 complex physically interacts with components of the basal transcription machinery and sequence-specific transcription factors to control histone modifications and pause release. | 0.540 |
| CG12674 | hyx | FBpp0077500 | FBpp0289644 | IP09436p; Chromatin binding; RNA polymerase II complex binding. It is involved in the biological process described with: transcription elongation from RNA polymerase II promoter; histone modification. | Hyrax, isoform A; Hyrax (hyx) encodes a protein recruited by signaling pathway specific transcriptional regulators such as the products of arm and ci and is important for the output of Wingless and Hedgehog pathways. | 0.963 |
| CG12674 | tplus3a | FBpp0077500 | FBpp0085288 | IP09436p; Chromatin binding; RNA polymerase II complex binding. It is involved in the biological process described with: transcription elongation from RNA polymerase II promoter; histone modification. | FI11009p; RNA polymerase II C-terminal domain phosphoserine binding; DNA binding. | 0.812 |
| CG12674 | tplus3b | FBpp0077500 | FBpp0085300 | IP09436p; Chromatin binding; RNA polymerase II complex binding. It is involved in the biological process described with: transcription elongation from RNA polymerase II promoter; histone modification. | Plus3 domain-containing protein; DNA binding; RNA polymerase II C-terminal domain phosphoserine binding. | 0.818 |
| CG3909 | CG12674 | FBpp0081650 | FBpp0077500 | WD_REPEATS_REGION domain-containing protein. | IP09436p; Chromatin binding; RNA polymerase II complex binding. It is involved in the biological process described with: transcription elongation from RNA polymerase II promoter; histone modification. | 0.752 |
| CG3909 | CG6220 | FBpp0081650 | FBpp0086776 | WD_REPEATS_REGION domain-containing protein. | FI06213p; RNA polymerase II complex binding. It is involved in the biological process described with: positive regulation of transcription elongation from RNA polymerase II promoter; recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex; histone modification; negative regulation of transcription by RNA polymerase II. | 0.979 |
| CG3909 | CG9899 | FBpp0081650 | FBpp0071879 | WD_REPEATS_REGION domain-containing protein. | TPR_REGION domain-containing protein; RNA polymerase II complex binding; SH2 domain binding. It is involved in the biological process described with: positive regulation of transcription by RNA polymerase II; regulation of transcription, DNA-templated; regulation of histone H3-K4 methylation. | 0.970 |
| CG3909 | Ctr9 | FBpp0081650 | FBpp0072561 | WD_REPEATS_REGION domain-containing protein. | Ctr9, isoform A; Ctr9 (Ctr9) encodes a highly conserved member of the polymerase-associated factor 1 complex, which controls a number of transcriptional and epigenetic processes. It is involved in the proliferation and terminal differentiation of the central nervous system. | 0.999 |
| CG3909 | Rtf1 | FBpp0081650 | FBpp0309752 | WD_REPEATS_REGION domain-containing protein. | RNA polymerase-associated protein Rtf1; Plays a role in transcription-coupled histone modification. Required for methylation of 'Lys-4' of histone H3. Plays a role in regulation of transcription. Required for maximal induction of heat- shock genes. Plays a role in Notch signaling in the wing margins. | 0.998 |
| CG3909 | atms | FBpp0081650 | FBpp0306920 | WD_REPEATS_REGION domain-containing protein. | Antimeros, isoform A; Antimeros (atms) encodes a component of the PAF1 complex (together with the products of Atu, hyx, Rtf1 and Ctr9). The PAF1 complex physically interacts with components of the basal transcription machinery and sequence-specific transcription factors to control histone modifications and pause release. | 0.994 |
| CG3909 | hyx | FBpp0081650 | FBpp0289644 | WD_REPEATS_REGION domain-containing protein. | Hyrax, isoform A; Hyrax (hyx) encodes a protein recruited by signaling pathway specific transcriptional regulators such as the products of arm and ci and is important for the output of Wingless and Hedgehog pathways. | 0.999 |
| CG3909 | tplus3a | FBpp0081650 | FBpp0085288 | WD_REPEATS_REGION domain-containing protein. | FI11009p; RNA polymerase II C-terminal domain phosphoserine binding; DNA binding. | 0.828 |
| CG3909 | tplus3b | FBpp0081650 | FBpp0085300 | WD_REPEATS_REGION domain-containing protein. | Plus3 domain-containing protein; DNA binding; RNA polymerase II C-terminal domain phosphoserine binding. | 0.828 |
| CG6220 | CG12674 | FBpp0086776 | FBpp0077500 | FI06213p; RNA polymerase II complex binding. It is involved in the biological process described with: positive regulation of transcription elongation from RNA polymerase II promoter; recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex; histone modification; negative regulation of transcription by RNA polymerase II. | IP09436p; Chromatin binding; RNA polymerase II complex binding. It is involved in the biological process described with: transcription elongation from RNA polymerase II promoter; histone modification. | 0.926 |
| CG6220 | CG3909 | FBpp0086776 | FBpp0081650 | FI06213p; RNA polymerase II complex binding. It is involved in the biological process described with: positive regulation of transcription elongation from RNA polymerase II promoter; recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex; histone modification; negative regulation of transcription by RNA polymerase II. | WD_REPEATS_REGION domain-containing protein. | 0.979 |
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