(5 nodes) U4 snRNP network (Drosophila navojoa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AWZ03_013057	Small nuclear ribonucleoprotein G. (76 aa)
	AWZ03_012465	Uncharacterized protein. (1014 aa)
	AWZ03_006308	Small nuclear ribonucleoprotein-associated protein. (198 aa)
	AWZ03_003198	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (124 aa)
	AWZ03_001896	Small nuclear ribonucleoprotein Sm D3. (151 aa)

Your Current Organism:

Drosophila navojoa

NCBI taxonomy Id: 7232
Other names: D. navojoa

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AWZ03_001896	AWZ03_003198	A0A484BSP6	A0A484BNF0	Small nuclear ribonucleoprotein Sm D3.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.999
AWZ03_001896	AWZ03_006308	A0A484BSP6	A0A484BHP2	Small nuclear ribonucleoprotein Sm D3.	Small nuclear ribonucleoprotein-associated protein.	0.999
AWZ03_001896	AWZ03_012465	A0A484BSP6	A0A484AZX0	Small nuclear ribonucleoprotein Sm D3.	Uncharacterized protein.	0.999
AWZ03_001896	AWZ03_013057	A0A484BSP6	A0A484AVW1	Small nuclear ribonucleoprotein Sm D3.	Small nuclear ribonucleoprotein G.	0.999
AWZ03_003198	AWZ03_001896	A0A484BNF0	A0A484BSP6	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein Sm D3.	0.999
AWZ03_003198	AWZ03_006308	A0A484BNF0	A0A484BHP2	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein-associated protein.	0.999
AWZ03_003198	AWZ03_012465	A0A484BNF0	A0A484AZX0	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Uncharacterized protein.	0.999
AWZ03_003198	AWZ03_013057	A0A484BNF0	A0A484AVW1	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein G.	0.999
AWZ03_006308	AWZ03_001896	A0A484BHP2	A0A484BSP6	Small nuclear ribonucleoprotein-associated protein.	Small nuclear ribonucleoprotein Sm D3.	0.999
AWZ03_006308	AWZ03_003198	A0A484BHP2	A0A484BNF0	Small nuclear ribonucleoprotein-associated protein.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.999
AWZ03_006308	AWZ03_012465	A0A484BHP2	A0A484AZX0	Small nuclear ribonucleoprotein-associated protein.	Uncharacterized protein.	0.998
AWZ03_006308	AWZ03_013057	A0A484BHP2	A0A484AVW1	Small nuclear ribonucleoprotein-associated protein.	Small nuclear ribonucleoprotein G.	0.999
AWZ03_012465	AWZ03_001896	A0A484AZX0	A0A484BSP6	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D3.	0.999
AWZ03_012465	AWZ03_003198	A0A484AZX0	A0A484BNF0	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.999
AWZ03_012465	AWZ03_006308	A0A484AZX0	A0A484BHP2	Uncharacterized protein.	Small nuclear ribonucleoprotein-associated protein.	0.998
AWZ03_012465	AWZ03_013057	A0A484AZX0	A0A484AVW1	Uncharacterized protein.	Small nuclear ribonucleoprotein G.	0.999
AWZ03_013057	AWZ03_001896	A0A484AVW1	A0A484BSP6	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein Sm D3.	0.999
AWZ03_013057	AWZ03_003198	A0A484AVW1	A0A484BNF0	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.999
AWZ03_013057	AWZ03_006308	A0A484AVW1	A0A484BHP2	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein-associated protein.	0.999
AWZ03_013057	AWZ03_012465	A0A484AVW1	A0A484AZX0	Small nuclear ribonucleoprotein G.	Uncharacterized protein.	0.999