(5 nodes) U12-type spliceosomal complex, and CPSF A subunit region network (Drosophila navojoa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AWZ03_010455	Uncharacterized protein. (340 aa)
	AWZ03_008717	Uncharacterized protein. (110 aa)
	AWZ03_004115	PSP domain-containing protein. (744 aa)
	AWZ03_003252	CPSF_A domain-containing protein. (1229 aa)
	AWZ03_000739	RRM domain-containing protein. (121 aa)

Your Current Organism:

Drosophila navojoa

NCBI taxonomy Id: 7232
Other names: D. navojoa

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AWZ03_000739	AWZ03_003252	A0A484BUM1	A0A484BNJ8	RRM domain-containing protein.	CPSF_A domain-containing protein.	0.999
AWZ03_000739	AWZ03_004115	A0A484BUM1	A0A484BML6	RRM domain-containing protein.	PSP domain-containing protein.	0.999
AWZ03_000739	AWZ03_008717	A0A484BUM1	A0A484B8E3	RRM domain-containing protein.	Uncharacterized protein.	0.999
AWZ03_000739	AWZ03_010455	A0A484BUM1	A0A484B397	RRM domain-containing protein.	Uncharacterized protein.	0.999
AWZ03_003252	AWZ03_000739	A0A484BNJ8	A0A484BUM1	CPSF_A domain-containing protein.	RRM domain-containing protein.	0.999
AWZ03_003252	AWZ03_004115	A0A484BNJ8	A0A484BML6	CPSF_A domain-containing protein.	PSP domain-containing protein.	0.999
AWZ03_003252	AWZ03_008717	A0A484BNJ8	A0A484B8E3	CPSF_A domain-containing protein.	Uncharacterized protein.	0.999
AWZ03_003252	AWZ03_010455	A0A484BNJ8	A0A484B397	CPSF_A domain-containing protein.	Uncharacterized protein.	0.999
AWZ03_004115	AWZ03_000739	A0A484BML6	A0A484BUM1	PSP domain-containing protein.	RRM domain-containing protein.	0.999
AWZ03_004115	AWZ03_003252	A0A484BML6	A0A484BNJ8	PSP domain-containing protein.	CPSF_A domain-containing protein.	0.999
AWZ03_004115	AWZ03_008717	A0A484BML6	A0A484B8E3	PSP domain-containing protein.	Uncharacterized protein.	0.999
AWZ03_004115	AWZ03_010455	A0A484BML6	A0A484B397	PSP domain-containing protein.	Uncharacterized protein.	0.999
AWZ03_008717	AWZ03_000739	A0A484B8E3	A0A484BUM1	Uncharacterized protein.	RRM domain-containing protein.	0.999
AWZ03_008717	AWZ03_003252	A0A484B8E3	A0A484BNJ8	Uncharacterized protein.	CPSF_A domain-containing protein.	0.999
AWZ03_008717	AWZ03_004115	A0A484B8E3	A0A484BML6	Uncharacterized protein.	PSP domain-containing protein.	0.999
AWZ03_008717	AWZ03_010455	A0A484B8E3	A0A484B397	Uncharacterized protein.	Uncharacterized protein.	0.999
AWZ03_010455	AWZ03_000739	A0A484B397	A0A484BUM1	Uncharacterized protein.	RRM domain-containing protein.	0.999
AWZ03_010455	AWZ03_003252	A0A484B397	A0A484BNJ8	Uncharacterized protein.	CPSF_A domain-containing protein.	0.999
AWZ03_010455	AWZ03_004115	A0A484B397	A0A484BML6	Uncharacterized protein.	PSP domain-containing protein.	0.999
AWZ03_010455	AWZ03_008717	A0A484B397	A0A484B8E3	Uncharacterized protein.	Uncharacterized protein.	0.999