(175 nodes) Homeobox, and DNA-binding transcription factor activity, RNA polymerase II-specific network (Drosophila persimilis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DperGL24118	GL24118. (229 aa)
	DperGL23421	GL23421. (327 aa)
	DperGL23004	GL23004. (387 aa)
	DperGL23002	GL23002. (562 aa)
	DperGL23001	GL23001. (536 aa)
	DperGL23326	GL23326. (537 aa)
	DperGL24224	GL24224. (491 aa)
	DperGL24283	GL24283. (178 aa)
	DperGL23122	GL23122. (349 aa)
	DperGL23782	GL23782. (1789 aa)
	DperGL23827	GL23827. (266 aa)
	DperGL23828	GL23828. (266 aa)
	DperGL19089	GL19089. (404 aa)
	DperGL19559	GL19559. (1228 aa)
	DperGL18566	GL18566. (971 aa)
	DperGL18986	GL18986. (228 aa)
	DperGL19170	GL19170. (102 aa)
	DperGL18480	GL18480. (1033 aa)
	DperGL18872	GL18872. (397 aa)
	DperGL18855	GL18855. (351 aa)
	DperGL18825	GL18825. (550 aa)
	DperGL19311	GL19311. (399 aa)
	DperGL18822	GL18822. (381 aa)
	DperGL19351	GL19351. (266 aa)
	DperGL19352	GL19352. (176 aa)
	DperGL19353	POU domain protein. (619 aa)
	DperGL19358	GL19358. (327 aa)
	DperGL19359	POU domain protein. (361 aa)
	DperGL18743	GL18743. (206 aa)
	DperGL18676	GL18676. (757 aa)
	DperGL18666	GL18666. (103 aa)
	DperGL18665	GL18665. (370 aa)
	DperGL19469	GL19469. (397 aa)
	DperGL19470	GL19470. (654 aa)
	DperGL18663	GL18663. (81 aa)
	DperGL11355	GL11355. (126 aa)
	DperGL11415	Homeobox protein engrailed-like. (625 aa)
	DperGL10677	Homeobox protein engrailed-like. (562 aa)
	DperGL10656	GL10656. (468 aa)
	DperGL11483	GL11483. (493 aa)
	DperGL11578	GL11578. (931 aa)
	DperGL11646	GL11646. (648 aa)
	DperGL10430	GL10430. (567 aa)
	DperGL11165	GL11165. (430 aa)
	DperGL11676	GL11676. (421 aa)
	DperGL11677	GL11677. (176 aa)
	DperGL10922	GL10922. (216 aa)
	DperGL11216	GL11216. (289 aa)
	DperGL11218	GL11218. (727 aa)
	DperGL11229	GL11229. (510 aa)
	DperGL21480	GL21480. (164 aa)
	DperGL21479	GL21479. (515 aa)
	DperGL21909	GL21909. (684 aa)
	DperGL21906	GL21906. (429 aa)
	DperGL21846	GL21846. (449 aa)
	DperGL22036	GL22036. (395 aa)
	DperGL21778	GL21778. (471 aa)
	DperGL22040	GL22040. (472 aa)
	DperGL22041	GL22041. (602 aa)
	Dperbcd	Bcd. (426 aa)
	DperGL22044	GL22044. (378 aa)
	DperGL21773	GL21773. (270 aa)
	DperGL22046	GL22046. (797 aa)
	DperGL22053	GL22053. (644 aa)
	DperGL21732	GL21732. (81 aa)
	DperGL21731	GL21731. (264 aa)
	DperGL22225	GL22225. (726 aa)
	DperGL17221	GL17221. (233 aa)
	DperGL17288	GL17288. (786 aa)
	DperGL17380	GL17380. (537 aa)
	DperGL17382	GL17382. (1173 aa)
	DperGL17416	GL17416. (401 aa)
	DperGL16994	GL16994. (310 aa)
	DperGL16944	GL16944. (469 aa)
	DperGL16874	GL16874. (923 aa)
	DperGL16839	GL16839. (491 aa)
	DperGL16831	GL16831. (461 aa)
	DperGL16823	GL16823. (504 aa)
	DperGL17676	GL17676. (410 aa)
	DperGL16779	GL16779. (328 aa)
	DperGL16768	GL16768. (362 aa)
	DperGL26208	Solute carrier organic anion transporter family member. (728 aa)
	DperGL25565	GL25565. (232 aa)
	DperGL25564	GL25564. (565 aa)
	DperGL26219	GL26219. (518 aa)
	DperGL25837	GL25837. (1109 aa)
	DperGL26094	GL26094. (103 aa)
	DperGL26097	Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (570 aa)
	DperGL25663	GL25663. (1056 aa)
	DperGL25653	GL25653. (887 aa)
	DperGL25620	GL25620. (446 aa)
	DperGL12681	GL12681. (330 aa)
	DperGL12325	GL12325. (292 aa)
	DperGL12355	GL12355. (467 aa)
	DperGL12254	GL12254. (190 aa)
	DperGL12402	GL12402. (284 aa)
	DperGL12213	GL12213. (760 aa)
	DperGL12422	GL12422. (253 aa)
	Dperhb	Hb. (776 aa)
	DperGL13537	GL13537. (565 aa)
	DperGL13525	GL13525. (589 aa)
	DperGL13521	GL13521. (454 aa)
	DperGL13516	GL13516. (92 aa)
	DperGL13714	GL13714. (522 aa)
	DperGL13677	GL13677. (161 aa)
	DperGL13893	GL13893. (436 aa)
	DperGL14513	GL14513. (236 aa)
	DperGL14130	GL14130. (601 aa)
	DperGL14075	GL14075. (1691 aa)
	DperGL14079	GL14079. (263 aa)
	DperGL25002	GL25002. (88 aa)
	DperGL25001	GL25001. (458 aa)
	DperGL25169	GL25169. (613 aa)
	DperGL24957	GL24957. (434 aa)
	DperGL24956	GL24956. (618 aa)
	DperGL25202	GL25202. (473 aa)
	DperGL25203	GL25203. (209 aa)
	DperGL25204	GL25204. (688 aa)
	DperGL25259	GL25259. (950 aa)
	DperGL24833	GL24833. (616 aa)
	DperGL25299	GL25299. (275 aa)
	DperGL25317	GL25317. (576 aa)
	DperGL14298	GL14298. (1478 aa)
	DperGL25136	GL25136. (2840 aa)
	DperGL25790	GL25790. (1016 aa)
	DperGL25910	GL25910. (316 aa)
	DperGL13034	GL13034. (332 aa)
	DperGL13035	GL13035. (222 aa)
	DperGL13041	GL13041. (264 aa)
	DperGL13044	GL13044. (251 aa)
	DperGL14690	GL14690. (1232 aa)
	DperGL14695	GL14695. (753 aa)
	DperGL14743	GL14743. (125 aa)
	DperGL14745	GL14745. (168 aa)
	DperGL14568	GL14568. (613 aa)
	DperGL14555	GL14555. (168 aa)
	DperGL14778	GL14778. (596 aa)
	DperGL16474	GL16474. (420 aa)
	DperGL16530	GL16530. (684 aa)
	DperGL16388	GL16388. (119 aa)
	DperGL16371	GL16371. (725 aa)
	DperGL21181	GL21181. (436 aa)
	DperGL21131	GL21131. (490 aa)
	DperGL20377	GL20377. (225 aa)
	DperGL20378	GL20378. (347 aa)
	DperGL27262	GL27262. (342 aa)
	DperGL27209	GL27209. (736 aa)
	DperGL22832	GL22832. (448 aa)
	DperGL22565	GL22565. (490 aa)
	DperGL18045	GL18045. (593 aa)
	DperGL26737	GL26737. (415 aa)
	DperGL20711	GL20711. (193 aa)
	DperGL10231	GL10231. (383 aa)
	DperGL10250	GL10250. (824 aa)
	DperGL19957	GL19957. (2107 aa)
	DperGL15563	GL15563. (469 aa)
	DperGL15500	GL15500. (590 aa)
	DperGL15578	GL15578. (412 aa)
	DperGL13276	GL13276. (681 aa)
	DperGL26986	GL26986. (116 aa)
	DperGL26985	GL26985. (269 aa)
	DperGL27035	GL27035. (373 aa)
	DperGL12762	GL12762. (455 aa)
	DperGL12751	GL12751. (392 aa)
	DperGL20983	GL20983. (612 aa)
	DperGL15695	GL15695. (572 aa)
	DperGL15332	GL15332. (89 aa)
	DperGL21380	GL21380. (740 aa)
	DperGL16921	GL16921. (103 aa)
	DperGL15612	GL15612. (599 aa)
	DperGL17563	GL17563. (546 aa)
	DperGL23921	GL23921. (57 aa)
	DperGL10055	GL10055. (266 aa)
	DperGL20974	GL20974. (1685 aa)
	DperGL13160	GL13160. (399 aa)

Your Current Organism:

Drosophila persimilis

NCBI taxonomy Id: 7234
Other names: D. persimilis

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Export your current network:

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file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

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same PNG format, but at higher resolution

... as a vector graphic:

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DperGL10055	DperGL13677	B4HCU0	B4GP44	GL10055.	GL13677.	0.487
DperGL10055	DperGL14075	B4HCU0	B4GQP3	GL10055.	GL14075.	0.534
DperGL10055	DperGL14079	B4HCU0	B4GQP4	GL10055.	GL14079.	0.534
DperGL10055	DperGL15332	B4HCU0	B4H9F7	GL10055.	GL15332.	0.700
DperGL10055	DperGL16779	B4HCU0	B4GIC8	GL10055.	GL16779.	0.570
DperGL10055	DperGL16839	B4HCU0	B4GI10	GL10055.	GL16839.	0.487
DperGL10055	DperGL18045	B4HCU0	B4H2B8	GL10055.	GL18045.	0.487
DperGL10055	DperGL21773	B4HCU0	B4GEN2	GL10055.	GL21773.	0.530
DperGL10055	DperGL21778	B4HCU0	B4GEM3	GL10055.	GL21778.	0.602
DperGL10055	DperGL22036	B4HCU0	B4GEM0	GL10055.	GL22036.	0.664
DperGL10055	DperGL22040	B4HCU0	B4GEM5	GL10055.	GL22040.	0.883
DperGL10055	DperGL22041	B4HCU0	B4GEM6	GL10055.	GL22041.	0.790
DperGL10055	DperGL22044	B4HCU0	B4GEN0	GL10055.	GL22044.	0.490
DperGL10055	DperGL22046	B4HCU0	B4GEN3	GL10055.	GL22046.	0.541
DperGL10055	DperGL22053	B4HCU0	B4GEP4	GL10055.	GL22053.	0.744
DperGL10055	DperGL22565	B4HCU0	B4H176	GL10055.	GL22565.	0.427
DperGL10055	DperGL23001	B4HCU0	B4G4I3	GL10055.	GL23001.	0.914
DperGL10055	DperGL23002	B4HCU0	B4G4B5	GL10055.	GL23002.	0.823
DperGL10055	DperGL23004	B4HCU0	B4G4B0	GL10055.	GL23004.	0.892
DperGL10055	DperGL23827	B4HCU0	B4G680	GL10055.	GL23827.	0.869