(103 nodes) Motor neuron axon guidance network (Drosophila persimilis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DperGL23619	GL23619. (403 aa)
	DperGL23588	GL23588. (993 aa)
	DperGL23945	GL23945. (439 aa)
	DperGL23946	GL23946. (407 aa)
	DperGL24445	GL24445. (323 aa)
	DperGL23278	GL23278. (705 aa)
	DperGL23266	GL23266. (566 aa)
	DperGL23164	GL23164. (302 aa)
	DperGL23160	GL23160. (299 aa)
	DperGL24367	GL24367. (342 aa)
	DperGL18974	Cyclin-dependent kinase 5 activator. (441 aa)
	DperGL19231	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (530 aa)
	DperGL18825	GL18825. (550 aa)
	DperGL19466	GL19466. (1482 aa)
	DperGL10711	GL10711. (1362 aa)
	DperGL11392	GL11392. (1428 aa)
	DperGL10588	GL10588. (348 aa)
	DperGL11490	GL11490. (348 aa)
	DperGL11507	GL11507; Belongs to the protein kinase superfamily. (294 aa)
	DperGL22250	GL22250. (1173 aa)
	DperGL17278	GL17278. (701 aa)
	DperGL17329	GL17329. (711 aa)
	DperGL17375	GL17375. (343 aa)
	DperGL17492	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (468 aa)
	DperGL16941	GL16941. (1000 aa)
	DperGL16768	GL16768. (362 aa)
	DperGL25558	GL25558. (1122 aa)
	DperGL25556	GL25556; Belongs to the semaphorin family. (905 aa)
	DperGL26223	GL26223. (773 aa)
	DperGL26255	GL26255. (2029 aa)
	DperGL12283	GL12283. (511 aa)
	DperGL13515	GL13515. (932 aa)
	DperGL13645	GL13645. (444 aa)
	DperGL13621	Metalloendopeptidase. (1458 aa)
	DperGL13887	GL13887. (73 aa)
	DperGL20562	GL20562. (87 aa)
	DperGL13888	GL13888. (1213 aa)
	DperGL15753	GL15753. (899 aa)
	DperGL14513	GL14513. (236 aa)
	DperGL25020	GL25020. (684 aa)
	DperGL25019	GL25019. (247 aa)
	DperGL25206	GL25206. (439 aa)
	DperGL14196	GL14196. (688 aa)
	DperGL14450	GL14450. (69 aa)
	DperGL14453	GL14453. (1268 aa)
	DperGL14455	GL14455. (2632 aa)
	DperGL25136	GL25136. (2840 aa)
	DperGL24253	GL24253. (192 aa)
	DperGL12906	GL12906. (316 aa)
	DperGL13108	GL13108. (382 aa)
	DperGL13109	GL13109. (476 aa)
	DperGL13110	GL13110. (906 aa)
	DperGL21040	GL21040. (402 aa)
	DperGL21181	GL21181. (436 aa)
	DperGL21131	GL21131. (490 aa)
	DperGL20412	GL20412. (540 aa)
	DperGL20414	GL20414. (298 aa)
	DperGL20416	GL20416. (698 aa)
	DperGL19950	GL19950. (2412 aa)
	DperGL19951	GL19951. (264 aa)
	DperGL27217	GL27217. (1586 aa)
	DperGL22867	GL22867. (673 aa)
	DperGL14936	GL14936. (962 aa)
	DperGL14851	GL14851. (599 aa)
	DperGL15028	GL15028. (666 aa)
	DperGL15029	GL15029. (915 aa)
	DperGL22428	GL22428. (117 aa)
	DperGL22427	GL22427. (187 aa)
	DperGL22426	GL22426. (107 aa)
	DperGL17944	GL17944. (452 aa)
	DperGL17945	GL17945. (680 aa)
	DperGL20762	GL20762. (378 aa)
	DperGL20761	GL20761. (83 aa)
	DperGL18265	GL18265. (191 aa)
	DperGL10127	GL10127. (1056 aa)
	DperGL16078	GL16078. (146 aa)
	DperGL20555	GL20555. (192 aa)
	DperGL13276	GL13276. (681 aa)
	DperGL13283	GL13283. (1601 aa)
	DperGL13284	GL13284. (413 aa)
	DperGL12785	GL12785. (490 aa)
	DperGL12806	GL12806. (103 aa)
	DperGL12721	GL12721. (386 aa)
	DperGL12720	GL12720. (408 aa)
	DperGL12719	GL12719. (248 aa)
	DperGL15703	GL15703. (784 aa)
	DperGL20917	GL20917; Belongs to the G-protein coupled receptor Fz/Smo family. (701 aa)
	DperGL20941	GL20941. (674 aa)
	DperGL20870	Guanylate cyclase. (415 aa)
	DperGL15323	GL15323. (351 aa)
	DperGL10347	GL10347; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (528 aa)
	DperGL18389	GL18389. (2069 aa)
	DperGL22653	GL22653. (1309 aa)
	DperGL22402	GL22402. (342 aa)
	DperGL22397	GL22397. (270 aa)
	DperGL22396	GL22396. (84 aa)
	DperGL24567	GL24567. (381 aa)
	DperGL24568	GL24568. (371 aa)
	DperGL21031	GL21031. (1423 aa)
	DperGL21029	GL21029. (937 aa)
	DperGL16660	GL16660. (277 aa)
	DperGL12856	GL12856. (324 aa)
	DperGL15105	GL15105. (235 aa)

Your Current Organism:

Drosophila persimilis

NCBI taxonomy Id: 7234
Other names: D. persimilis

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same PNG format, but at higher resolution

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DperGL10347	DperGL16941	B4H9M1	B4GHH5	GL10347; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	GL16941.	0.855
DperGL10347	DperGL17492	B4H9M1	B4GHA9	GL10347; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.	0.627
DperGL10711	DperGL12719	B4GAG0	B4H7Z1	GL10711.	GL12719.	0.539
DperGL10711	DperGL12720	B4GAG0	B4H7Z0	GL10711.	GL12720.	0.539
DperGL10711	DperGL12721	B4GAG0	B4H7Y9	GL10711.	GL12721.	0.539
DperGL10711	DperGL17492	B4GAG0	B4GHA9	GL10711.	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.	0.495
DperGL11392	DperGL18389	B4GAJ3	B4H9N3	GL11392.	GL18389.	0.431
DperGL11507	DperGL18389	B4GB85	B4H9N3	GL11507; Belongs to the protein kinase superfamily.	GL18389.	0.556
DperGL11507	DperGL18974	B4GB85	B4G7J4	GL11507; Belongs to the protein kinase superfamily.	Cyclin-dependent kinase 5 activator.	0.996
DperGL11507	DperGL20555	B4GB85	B4H6A5	GL11507; Belongs to the protein kinase superfamily.	GL20555.	0.430
DperGL11507	DperGL25556	B4GB85	B4GJ66	GL11507; Belongs to the protein kinase superfamily.	GL25556; Belongs to the semaphorin family.	0.452
DperGL12719	DperGL10711	B4H7Z1	B4GAG0	GL12719.	GL10711.	0.539
DperGL12719	DperGL12720	B4H7Z1	B4H7Z0	GL12719.	GL12720.	0.495
DperGL12719	DperGL16078	B4H7Z1	B4H5K8	GL12719.	GL16078.	0.440
DperGL12719	DperGL18265	B4H7Z1	B4H4Q6	GL12719.	GL18265.	0.440
DperGL12719	DperGL24253	B4H7Z1	B4GUQ6	GL12719.	GL24253.	0.440
DperGL12720	DperGL10711	B4H7Z0	B4GAG0	GL12720.	GL10711.	0.539
DperGL12720	DperGL12719	B4H7Z0	B4H7Z1	GL12720.	GL12719.	0.495
DperGL12720	DperGL16078	B4H7Z0	B4H5K8	GL12720.	GL16078.	0.440
DperGL12720	DperGL18265	B4H7Z0	B4H4Q6	GL12720.	GL18265.	0.440