(5 nodes) Attachment of GPI anchor to protein network (Drosophila persimilis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DperGL23076	GL23076. (497 aa)
	DperGL26132	GL26132. (426 aa)
	DperGL16569	GL16569. (642 aa)
	DperGL15212	GL15212. (672 aa)
	DperGL15131	GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family. (355 aa)

Your Current Organism:

Drosophila persimilis

NCBI taxonomy Id: 7234
Other names: D. persimilis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DperGL15131	DperGL15212	B4H3W8	B4H3N9	GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.	GL15212.	0.999
DperGL15131	DperGL16569	B4H3W8	B4GWL5	GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.	GL16569.	0.999
DperGL15131	DperGL23076	B4H3W8	B4G3K7	GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.	GL23076.	0.996
DperGL15131	DperGL26132	B4H3W8	B4GKQ1	GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.	GL26132.	0.999
DperGL15212	DperGL15131	B4H3N9	B4H3W8	GL15212.	GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.	0.999
DperGL15212	DperGL16569	B4H3N9	B4GWL5	GL15212.	GL16569.	0.999
DperGL15212	DperGL23076	B4H3N9	B4G3K7	GL15212.	GL23076.	0.996
DperGL15212	DperGL26132	B4H3N9	B4GKQ1	GL15212.	GL26132.	0.999
DperGL16569	DperGL15131	B4GWL5	B4H3W8	GL16569.	GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.	0.999
DperGL16569	DperGL15212	B4GWL5	B4H3N9	GL16569.	GL15212.	0.999
DperGL16569	DperGL23076	B4GWL5	B4G3K7	GL16569.	GL23076.	0.997
DperGL16569	DperGL26132	B4GWL5	B4GKQ1	GL16569.	GL26132.	0.999
DperGL23076	DperGL15131	B4G3K7	B4H3W8	GL23076.	GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.	0.996
DperGL23076	DperGL15212	B4G3K7	B4H3N9	GL23076.	GL15212.	0.996
DperGL23076	DperGL16569	B4G3K7	B4GWL5	GL23076.	GL16569.	0.997
DperGL23076	DperGL26132	B4G3K7	B4GKQ1	GL23076.	GL26132.	0.996
DperGL26132	DperGL15131	B4GKQ1	B4H3W8	GL26132.	GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.	0.999
DperGL26132	DperGL15212	B4GKQ1	B4H3N9	GL26132.	GL15212.	0.999
DperGL26132	DperGL16569	B4GKQ1	B4GWL5	GL26132.	GL16569.	0.999
DperGL26132	DperGL23076	B4GKQ1	B4G3K7	GL26132.	GL23076.	0.996