(36 nodes) Oocyte microtubule cytoskeleton organization network (Drosophila persimilis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DperGL23544	GL23544. (561 aa)
	DperGL10059	GL10059. (120 aa)
	DperGL10056	GL10056. (63 aa)
	DperGL11922	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1680 aa)
	DperGL15047	GL15047. (1460 aa)
	DperGL10152	GL10152. (147 aa)
	DperGL19872	GL19872. (1204 aa)
	DperGL13058	GL13058. (216 aa)
	DperGL13057	GL13057. (439 aa)
	DperGL24352	GL24352. (377 aa)
	DperGL25387	GL25387; Belongs to the 14-3-3 family. (250 aa)
	DperGL15959	GL15959. (779 aa)
	DperGL15023	GL15023. (666 aa)
	DperGL15032	GL15032. (129 aa)
	DperGL13710	GL13710. (720 aa)
	DperGL13737	GL13737. (374 aa)
	DperGL12218	GL12218. (2054 aa)
	DperGL17609	GL17609; Belongs to the 14-3-3 family. (248 aa)
	DperGL17589	GL17589. (831 aa)
	DperGL17128	GL17128. (380 aa)
	DperGL21554	GL21554. (619 aa)
	DperGL21786	GL21786. (214 aa)
	DperGL21790	GL21790; Belongs to the 14-3-3 family. (262 aa)
	DperGL10531	Non-specific serine/threonine protein kinase. (1212 aa)
	DperGL11356	GL11356; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1211 aa)
	DperGL18802	GL18802. (510 aa)
	DperGL18897	GL18897. (208 aa)
	DperGL19216	GL19216. (546 aa)
	DperGL23846	GL23846. (139 aa)
	DperGL23845	GL23845. (668 aa)
	DperGL23844	GL23844. (170 aa)
	DperGL23041	GL23041. (298 aa)
	DperGL23043	GL23043. (974 aa)
	DperGL24102	GL24102. (494 aa)
	DperGL23070	GL23070. (251 aa)
	DperGL23974	GL23974. (341 aa)

Your Current Organism:

Drosophila persimilis

NCBI taxonomy Id: 7234
Other names: D. persimilis

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DperGL10152	DperGL13710	B4H4W8	B4GNW7	GL10152.	GL13710.	0.990
DperGL10152	DperGL21554	B4H4W8	B4GFV0	GL10152.	GL21554.	0.460
DperGL10531	DperGL17609	B4GBE6	B4GHX2	Non-specific serine/threonine protein kinase.	GL17609; Belongs to the 14-3-3 family.	0.568
DperGL10531	DperGL19872	B4GBE6	B4GY90	Non-specific serine/threonine protein kinase.	GL19872.	0.457
DperGL10531	DperGL21790	B4GBE6	B4GEK3	Non-specific serine/threonine protein kinase.	GL21790; Belongs to the 14-3-3 family.	0.568
DperGL10531	DperGL25387	B4GBE6	B4GU54	Non-specific serine/threonine protein kinase.	GL25387; Belongs to the 14-3-3 family.	0.568
DperGL11356	DperGL17128	B4GAD8	B4GGJ2	GL11356; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	GL17128.	0.562
DperGL11922	DperGL21786	B4HCA2	B4GEK9	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	GL21786.	0.812
DperGL12218	DperGL15047	B4GML2	B4HAY8	GL12218.	GL15047.	0.544
DperGL12218	DperGL21786	B4GML2	B4GEK9	GL12218.	GL21786.	0.523
DperGL13710	DperGL10152	B4GNW7	B4H4W8	GL13710.	GL10152.	0.990
DperGL13737	DperGL23844	B4GNR7	B4G6D9	GL13737.	GL23844.	0.436
DperGL13737	DperGL23845	B4GNR7	B4G6E1	GL13737.	GL23845.	0.436
DperGL13737	DperGL23846	B4GNR7	B4G6E2	GL13737.	GL23846.	0.436
DperGL15023	DperGL15032	B4GPY9	B4GPY8	GL15023.	GL15032.	0.900
DperGL15032	DperGL15023	B4GPY8	B4GPY9	GL15032.	GL15023.	0.900
DperGL15047	DperGL12218	B4HAY8	B4GML2	GL15047.	GL12218.	0.544
DperGL15047	DperGL21786	B4HAY8	B4GEK9	GL15047.	GL21786.	0.535
DperGL15959	DperGL17128	B4GQC4	B4GGJ2	GL15959.	GL17128.	0.974
DperGL15959	DperGL17589	B4GQC4	B4GHT2	GL15959.	GL17589.	0.908