(61 nodes) Cytosolic large ribosomal subunit network (Drosophila persimilis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DperGL22011	GL22011. (159 aa)
	DperGL21879	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
	DperGL21963	GL21963. (218 aa)
	DperGL10890	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (203 aa)
	DperGL10425	GL10425. (66 aa)
	DperGL11659	GL11659; Belongs to the universal ribosomal protein uL11 family. (165 aa)
	DperGL10622	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (177 aa)
	DperGL11334	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (76 aa)
	DperGL19381	GL19381; Belongs to the eukaryotic ribosomal protein eL42 family. (111 aa)
	DperGL19320	GL19320. (92 aa)
	DperGL18876	GL18876; Belongs to the eukaryotic ribosomal protein P1/P2 family. (112 aa)
	DperGL18951	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (217 aa)
	DperGL18963	GL18963. (157 aa)
	DperGL19015	GL19015. (190 aa)
	DperGL24326	GL24326. (111 aa)
	DperGL22988	GL22988. (319 aa)
	DperGL24509	GL24509; Belongs to the universal ribosomal protein uL13 family. (205 aa)
	DperGL23887	GL23887. (243 aa)
	DperGL23641	GL23641. (401 aa)
	DperGL13157	GL13157. (64 aa)
	DperGL16367	GL16367. (238 aa)
	DperGL20703	GL20703; Belongs to the eukaryotic ribosomal protein P1/P2 family. (114 aa)
	DperGL13213	GL13213. (187 aa)
	DperGL18200	GL18200. (583 aa)
	DperGL18207	GL18207. (103 aa)
	DperGL18205	GL18205. (186 aa)
	DperGL16652	GL16652; Belongs to the eukaryotic ribosomal protein eL38 family. (70 aa)
	DperGL21281	GL21281. (144 aa)
	DperGL10322	GL10322. (166 aa)
	DperGL10129	GL10129; Belongs to the universal ribosomal protein uL14 family. (140 aa)
	DperGL18236	GL18236. (123 aa)
	DperGL20819	GL20819. (59 aa)
	DperGL20818	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (154 aa)
	DperGL12432	GL12432; Belongs to the universal ribosomal protein uL23 family. (266 aa)
	DperGL26747	GL26747. (303 aa)
	DperGL22453	GL22453. (150 aa)
	DperGL15908	GL15908. (111 aa)
	DperGL20290	GL20290. (102 aa)
	DperGL21177	GL21177. (299 aa)
	DperGL21175	GL21175. (159 aa)
	DperGL14685	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (115 aa)
	DperGL13062	GL13062. (305 aa)
	DperGL14343	GL14343. (102 aa)
	DperGL14341	GL14341. (102 aa)
	DperGL14340	GL14340. (106 aa)
	DperGL14284	GL14284. (110 aa)
	DperGL14313	GL14313. (271 aa)
	DperGL24902	GL24902. (189 aa)
	DperGL13989	GL13989. (128 aa)
	DperGL16173	GL16173. (279 aa)
	DperGL15400	GL15400; Belongs to the universal ribosomal protein uL15 family. (149 aa)
	DperGL13673	GL13673. (170 aa)
	DperRpL32	RpL32. (134 aa)
	DperGL12604	GL12604. (192 aa)
	DperGL12566	GL12566; Belongs to the universal ribosomal protein uL3 family. (415 aa)
	DperGL25708	GL25708. (155 aa)
	DperGL17744	GL17744; Belongs to the universal ribosomal protein uL5 family. (188 aa)
	DperGL16862	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (251 aa)
	DperGL17146	GL17146. (124 aa)
	DperGL22302	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (135 aa)
	DperGL22165	GL22165. (159 aa)

Your Current Organism:

Drosophila persimilis

NCBI taxonomy Id: 7234
Other names: D. persimilis

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DperGL10129	DperGL10322	B4H515	B4H9I1	GL10129; Belongs to the universal ribosomal protein uL14 family.	GL10322.	0.999
DperGL10129	DperGL10425	B4H515	B4GCJ3	GL10129; Belongs to the universal ribosomal protein uL14 family.	GL10425.	0.999
DperGL10129	DperGL10622	B4H515	B4GAZ1	GL10129; Belongs to the universal ribosomal protein uL14 family.	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.	0.999
DperGL10129	DperGL10890	B4H515	B4GD36	GL10129; Belongs to the universal ribosomal protein uL14 family.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.999
DperGL10129	DperGL11334	B4H515	B4GA82	GL10129; Belongs to the universal ribosomal protein uL14 family.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.994
DperGL10129	DperGL11659	B4H515	B4GCJ2	GL10129; Belongs to the universal ribosomal protein uL14 family.	GL11659; Belongs to the universal ribosomal protein uL11 family.	0.999
DperGL10129	DperGL12432	B4H515	B4H3F6	GL10129; Belongs to the universal ribosomal protein uL14 family.	GL12432; Belongs to the universal ribosomal protein uL23 family.	0.999
DperGL10129	DperGL12566	B4H515	B4GLH0	GL10129; Belongs to the universal ribosomal protein uL14 family.	GL12566; Belongs to the universal ribosomal protein uL3 family.	0.999
DperGL10129	DperGL12604	B4H515	B4GLN3	GL10129; Belongs to the universal ribosomal protein uL14 family.	GL12604.	0.989
DperGL10129	DperGL13062	B4H515	B4GUY7	GL10129; Belongs to the universal ribosomal protein uL14 family.	GL13062.	0.999
DperGL10129	DperGL13157	B4H515	B4IRJ6	GL10129; Belongs to the universal ribosomal protein uL14 family.	GL13157.	0.999
DperGL10129	DperGL13213	B4H515	B4HCC0	GL10129; Belongs to the universal ribosomal protein uL14 family.	GL13213.	0.992
DperGL10129	DperGL13673	B4H515	B4GP54	GL10129; Belongs to the universal ribosomal protein uL14 family.	GL13673.	0.994
DperGL10129	DperGL13989	B4H515	B4GQQ7	GL10129; Belongs to the universal ribosomal protein uL14 family.	GL13989.	0.999
DperGL10129	DperGL14284	B4H515	B4GTF4	GL10129; Belongs to the universal ribosomal protein uL14 family.	GL14284.	0.954
DperGL10129	DperGL14313	B4H515	B4GTB4	GL10129; Belongs to the universal ribosomal protein uL14 family.	GL14313.	0.994
DperGL10129	DperGL14340	B4H515	B4GTF8	GL10129; Belongs to the universal ribosomal protein uL14 family.	GL14340.	0.954
DperGL10129	DperGL14341	B4H515	B4GTF9	GL10129; Belongs to the universal ribosomal protein uL14 family.	GL14341.	0.954
DperGL10129	DperGL14343	B4H515	B4GTG0	GL10129; Belongs to the universal ribosomal protein uL14 family.	GL14343.	0.954
DperGL10129	DperGL14685	B4H515	B4GVN1	GL10129; Belongs to the universal ribosomal protein uL14 family.	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.	0.999