35 items (Drosophila persimilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DperGL18646	Serine/threonine-protein phosphatase. (309 aa)
	DperGL24300	GL24300. (522 aa)
	DperGL19555	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (621 aa)
	DperGL18478	GL18478; Belongs to the 5'-nucleotidase family. (510 aa)
	DperGL18726	GL18726. (370 aa)
	DperGL24566	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (328 aa)
	DperGL16296	GL16296. (499 aa)
	DperGL12713	GL12713. (303 aa)
	DperGL20005	GL20005. (471 aa)
	DperGL26775	Serine/threonine-protein phosphatase. (303 aa)
	DperGL26791	Serine/threonine-protein phosphatase. (307 aa)
	DperGL22609	GL22609. (538 aa)
	DperGL27176	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (302 aa)
	DperGL19972	Serine/threonine-protein phosphatase. (602 aa)
	DperGL19971	Serine/threonine-protein phosphatase. (235 aa)
	DperGL14744	GL14744. (268 aa)
	DperGL14718	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (298 aa)
	DperGL14607	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (298 aa)
	DperGL14292	Purple acid phosphatase. (462 aa)
	DperGL14293	Purple acid phosphatase. (404 aa)
	DperGL14294	Purple acid phosphatase. (417 aa)
	DperGL25126	Serine/threonine-protein phosphatase. (782 aa)
	DperGL13457	Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide. (675 aa)
	DperGL13458	Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide. (666 aa)
	DperGL13533	Serine/threonine-protein phosphatase. (631 aa)
	DperGL17515	Serine/threonine-protein phosphatase. (339 aa)
	DperGL17514	Serine/threonine-protein phosphatase. (308 aa)
	DperGL16956	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (354 aa)
	DperGL16957	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (312 aa)
	DperGL17506	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (274 aa)
	DperGL17499	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (342 aa)
	DperGL17298	GL17298; Belongs to the 5'-nucleotidase family. (716 aa)
	DperGL11542	GL11542. (355 aa)
	DperGL11430	GL11430; Belongs to the 5'-nucleotidase family. (577 aa)
	DperGL11429	GL11429; Belongs to the 5'-nucleotidase family. (727 aa)

Your Current Organism:

Drosophila persimilis

NCBI taxonomy Id: 7234
Other names: D. persimilis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DperGL11430	DperGL17298	B4GAS0	B4GG78	GL11430; Belongs to the 5'-nucleotidase family.	GL17298; Belongs to the 5'-nucleotidase family.	0.920
DperGL13457	DperGL13458	B4GNM7	B4GNM6	Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide.	Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide.	0.958
DperGL13457	DperGL20005	B4GNM7	B4H694	Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide.	GL20005.	0.911
DperGL13458	DperGL13457	B4GNM6	B4GNM7	Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide.	Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide.	0.958
DperGL13458	DperGL20005	B4GNM6	B4H694	Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide.	GL20005.	0.911
DperGL13533	DperGL19971	B4GN82	B4GYQ9	Serine/threonine-protein phosphatase.	Serine/threonine-protein phosphatase.	0.916
DperGL13533	DperGL19972	B4GN82	B4GYR0	Serine/threonine-protein phosphatase.	Serine/threonine-protein phosphatase.	0.916
DperGL17298	DperGL11430	B4GG78	B4GAS0	GL17298; Belongs to the 5'-nucleotidase family.	GL11430; Belongs to the 5'-nucleotidase family.	0.920
DperGL18646	DperGL26791	B4G9I0	B4H2H5	Serine/threonine-protein phosphatase.	Serine/threonine-protein phosphatase.	0.846
DperGL19971	DperGL13533	B4GYQ9	B4GN82	Serine/threonine-protein phosphatase.	Serine/threonine-protein phosphatase.	0.916
DperGL19971	DperGL19972	B4GYQ9	B4GYR0	Serine/threonine-protein phosphatase.	Serine/threonine-protein phosphatase.	0.901
DperGL19972	DperGL13533	B4GYR0	B4GN82	Serine/threonine-protein phosphatase.	Serine/threonine-protein phosphatase.	0.916
DperGL19972	DperGL19971	B4GYR0	B4GYQ9	Serine/threonine-protein phosphatase.	Serine/threonine-protein phosphatase.	0.901
DperGL20005	DperGL13457	B4H694	B4GNM7	GL20005.	Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide.	0.911
DperGL20005	DperGL13458	B4H694	B4GNM6	GL20005.	Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide.	0.911
DperGL26791	DperGL18646	B4H2H5	B4G9I0	Serine/threonine-protein phosphatase.	Serine/threonine-protein phosphatase.	0.846