40 items (Drosophila persimilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DperGL21463	GL21463. (401 aa)
	DperGL10505	GL10505. (426 aa)
	DperGL15509	GL15509. (708 aa)
	DperGL24695	GL24695. (285 aa)
	DperGL16204	GL16204. (307 aa)
	DperGL16176	GL16176. (1180 aa)
	DperGL18298	GL18298. (922 aa)
	DperGL22516	GL22516. (220 aa)
	DperGL24784	Protein YIPF. (261 aa)
	DperGL15861	Histone H2B; Belongs to the histone H2B family. (127 aa)
	DperGL27199	GL27199. (344 aa)
	DperGL19928	GL19928. (250 aa)
	DperGL20216	GL20216. (552 aa)
	DperGL10311	E3 ubiquitin protein ligase. (1047 aa)
	DperGL15994	GL15994. (188 aa)
	DperGL17108	GL17108. (287 aa)
	DperGL23858	Histone H2B; Belongs to the histone H2B family. (204 aa)
	DperGL20284	GL20284. (382 aa)
	DperGL19498	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family. (297 aa)
	DperGL18707	GL18707. (219 aa)
	DperGL18966	GL18966. (156 aa)
	DperGL18543	GL18543. (810 aa)
	DperGL23670	GL23670; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
	DperGL24351	GL24351. (147 aa)
	DperGL24508	GL24508. (719 aa)
	DperGL23559	GL23559. (54 aa)
	DperGL23561	Histone H2B; Belongs to the histone H2B family. (123 aa)
	DperGL20619	GL20619. (231 aa)
	DperGL25194	GL25194. (216 aa)
	DperGL13989	GL13989. (128 aa)
	DperGL14576	GL14576. (282 aa)
	DperGL13475	GL13475. (360 aa)
	DperGL12117	GL12117. (540 aa)
	DperGL25666	GL25666. (656 aa)
	DperGL17538	GL17538. (764 aa)
	DperGL17508	GL17508. (520 aa)
	DperGL17469	GL17469. (280 aa)
	DperGL21617	GL21617. (559 aa)
	DperGL22213	GL22213; Belongs to the ubiquitin-conjugating enzyme family. (151 aa)
	DperGL12812	GL12812. (246 aa)

Your Current Organism:

Drosophila persimilis

NCBI taxonomy Id: 7234
Other names: D. persimilis

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DperGL10311	DperGL12117	B4H9M6	B4GL28	E3 ubiquitin protein ligase.	GL12117.	0.786
DperGL10311	DperGL13989	B4H9M6	B4GQQ7	E3 ubiquitin protein ligase.	GL13989.	0.515
DperGL10311	DperGL14576	B4H9M6	B4GQ79	E3 ubiquitin protein ligase.	GL14576.	0.448
DperGL10311	DperGL15861	B4H9M6	B4H0W8	E3 ubiquitin protein ligase.	Histone H2B; Belongs to the histone H2B family.	0.683
DperGL10311	DperGL15994	B4H9M6	B4H9V5	E3 ubiquitin protein ligase.	GL15994.	0.727
DperGL10311	DperGL16176	B4H9M6	B4H5L2	E3 ubiquitin protein ligase.	GL16176.	0.727
DperGL10311	DperGL16204	B4H9M6	B4H5Q6	E3 ubiquitin protein ligase.	GL16204.	0.498
DperGL10311	DperGL17469	B4H9M6	B4GH63	E3 ubiquitin protein ligase.	GL17469.	0.786
DperGL10311	DperGL17508	B4H9M6	B4GHE1	E3 ubiquitin protein ligase.	GL17508.	0.765
DperGL10311	DperGL17538	B4H9M6	B4GHJ7	E3 ubiquitin protein ligase.	GL17538.	0.648
DperGL10311	DperGL18298	B4H9M6	B4H4P2	E3 ubiquitin protein ligase.	GL18298.	0.881
DperGL10311	DperGL18543	B4H9M6	B4G6Z5	E3 ubiquitin protein ligase.	GL18543.	0.691
DperGL10311	DperGL18707	B4H9M6	B4G959	E3 ubiquitin protein ligase.	GL18707.	0.671
DperGL10311	DperGL18966	B4H9M6	B4G7L0	E3 ubiquitin protein ligase.	GL18966.	0.680
DperGL10311	DperGL19928	B4H9M6	B4GYI6	E3 ubiquitin protein ligase.	GL19928.	0.516
DperGL10311	DperGL20284	B4H9M6	B4GXI6	E3 ubiquitin protein ligase.	GL20284.	0.498
DperGL10311	DperGL20619	B4H9M6	B4GXI5	E3 ubiquitin protein ligase.	GL20619.	0.498
DperGL10311	DperGL21617	B4H9M6	B4GFJ1	E3 ubiquitin protein ligase.	GL21617.	0.886
DperGL10311	DperGL22213	B4H9M6	B4GFH3	E3 ubiquitin protein ligase.	GL22213; Belongs to the ubiquitin-conjugating enzyme family.	0.998
DperGL10311	DperGL22516	B4H9M6	B4H1A5	E3 ubiquitin protein ligase.	GL22516.	0.448