(33 nodes) Melanotic encapsulation of foreign target network (Drosophila sechellia)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DsecGM26254	GM26254. (190 aa)
	DsecGM25147	GM25147. (409 aa)
	DsecGM20164	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (954 aa)
	DsecGM16855	GM16855. (364 aa)
	DsecGM21680	GM21680. (1305 aa)
	DsecGM12049	GM12049; Belongs to the band 7/mec-2 family. Flotillin subfamily. (438 aa)
	DsecGM26804	GM26804. (517 aa)
	DsecGM26803	GM26803. (544 aa)
	DsecGM26801	GM26801; Belongs to the ephrin family. (652 aa)
	DsecGM23386	Integrin beta; Belongs to the integrin beta chain family. (800 aa)
	DsecGM23367	GM23367. (454 aa)
	DsecGM16713	GM16713; Belongs to the DOCK family. (2064 aa)
	DsecGM22119	GM22119. (1485 aa)
	DsecGM22285	GM22285. (735 aa)
	DsecGM15980	GM15980. (669 aa)
	DsecGM22983	GM22983. (154 aa)
	DsecGM22955	GM22955. (704 aa)
	DsecGM14001	GM14001; Belongs to the serpin family. (431 aa)
	DsecGM11780	Cyclin-dependent kinase 5 activator. (406 aa)
	DsecGM11890	GM11890. (514 aa)
	DsecGM14225	GM14225. (192 aa)
	DsecGM14333	GM14333. (1064 aa)
	DsecGM13759	GM13759. (192 aa)
	DsecGM13851	GM13851. (3694 aa)
	DsecGM13854	GM13854. (435 aa)
	DsecGM13945	GM13945. (1237 aa)
	DsecGM13947	GM13947. (2194 aa)
	DsecGM20638	GM20638. (684 aa)
	DsecGM20132	GM20132; Belongs to the protein kinase superfamily. (294 aa)
	DsecGM25947	GM25947. (251 aa)
	DsecGM25436	GM25436. (1265 aa)
	DsecGM25489	GM25489. (819 aa)
	DsecGM25679	GM25679. (1049 aa)

Your Current Organism:

Drosophila sechellia

NCBI taxonomy Id: 7238
Other names: D. sechellia

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DsecGM11780	DsecGM20132	B4HWK3	B4HS61	Cyclin-dependent kinase 5 activator.	GM20132; Belongs to the protein kinase superfamily.	0.998
DsecGM11890	DsecGM14333	B4HWI7	B4HVE8	GM11890.	GM14333.	0.553
DsecGM11890	DsecGM20132	B4HWI7	B4HS61	GM11890.	GM20132; Belongs to the protein kinase superfamily.	0.441
DsecGM11890	DsecGM20164	B4HWI7	B4HRS5	GM11890.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.674
DsecGM11890	DsecGM22285	B4HWI7	B4IA94	GM11890.	GM22285.	0.571
DsecGM11890	DsecGM22983	B4HWI7	B4I7A4	GM11890.	GM22983.	0.672
DsecGM11890	DsecGM23386	B4HWI7	B4IFJ1	GM11890.	Integrin beta; Belongs to the integrin beta chain family.	0.470
DsecGM11890	DsecGM25147	B4HWI7	B4HKQ4	GM11890.	GM25147.	0.510
DsecGM11890	DsecGM26803	B4HWI7	B4IIX5	GM11890.	GM26803.	0.472
DsecGM11890	DsecGM26804	B4HWI7	B4IIX6	GM11890.	GM26804.	0.472
DsecGM13759	DsecGM14225	B4HV68	B4HVR1	GM13759.	GM14225.	0.920
DsecGM13759	DsecGM14333	B4HV68	B4HVE8	GM13759.	GM14333.	0.684
DsecGM13759	DsecGM16713	B4HV68	B4ICR4	GM13759.	GM16713; Belongs to the DOCK family.	0.681
DsecGM13759	DsecGM20164	B4HV68	B4HRS5	GM13759.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.453
DsecGM13759	DsecGM22955	B4HV68	B4I737	GM13759.	GM22955.	0.867
DsecGM13759	DsecGM23367	B4HV68	B4IFF6	GM13759.	GM23367.	0.682
DsecGM13759	DsecGM23386	B4HV68	B4IFJ1	GM13759.	Integrin beta; Belongs to the integrin beta chain family.	0.442
DsecGM13759	DsecGM26801	B4HV68	B4IIX2	GM13759.	GM26801; Belongs to the ephrin family.	0.432
DsecGM13759	DsecGM26803	B4HV68	B4IIX5	GM13759.	GM26803.	0.429
DsecGM13759	DsecGM26804	B4HV68	B4IIX6	GM13759.	GM26804.	0.429