(38 nodes) Signaling adaptor activity network (Drosophila sechellia)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DsecGM15025	GM15025. (219 aa)
	DsecGM24172	GM24172. (94 aa)
	DsecGM24171	GM24171. (1045 aa)
	DsecGM24599	GM24599. (389 aa)
	DsecGM24981	GM24981. (95 aa)
	DsecGM24980	GM24980. (1107 aa)
	DsecGM25012	GM25012. (212 aa)
	DsecGM25014	GM25014. (99 aa)
	DsecGM25015	GM25015. (1079 aa)
	DsecGM19986	GM19986. (1551 aa)
	DsecGM21946	GM21946. (834 aa)
	DsecGM20273	GM20273. (211 aa)
	DsecGM20803	GM20803; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1154 aa)
	DsecGM20234	GM20234. (1820 aa)
	DsecGM20233	GM20233. (64 aa)
	DsecGM21586	GM21586. (918 aa)
	DsecGM20612	GM20612. (539 aa)
	DsecGM14496	GM14496. (876 aa)
	DsecGM14376	GM14376. (483 aa)
	DsecGM18873	GM18873. (483 aa)
	DsecGM18885	GM18885. (443 aa)
	DsecGM14198	GM14198. (471 aa)
	DsecGM12946	GM12946. (443 aa)
	DsecGM12865	GM12865. (196 aa)
	DsecGM10629	GM10629. (959 aa)
	DsecGM15606	GM15606. (675 aa)
	DsecGM19196	GM19196. (122 aa)
	DsecGM19198	GM19198. (939 aa)
	DsecGM10272	GM10272. (724 aa)
	DsecGM16771	GM16771. (548 aa)
	DsecGM11474	GM11474. (601 aa)
	DsecGM10366	GM10366. (487 aa)
	DsecGM11518	GM11518. (1180 aa)
	DsecGM17514	GM17514. (624 aa)
	DsecGM19633	GM19633. (346 aa)
	DsecGM22591	GM22591. (324 aa)
	DsecGM11205	GM11205. (358 aa)
	DsecGM23242	GM23242. (271 aa)

Your Current Organism:

Drosophila sechellia

NCBI taxonomy Id: 7238
Other names: D. sechellia

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DsecGM10272	DsecGM20273	B4ICF2	B4HQJ5	GM10272.	GM20273.	0.730
DsecGM10629	DsecGM11518	B4I411	B4IGL9	GM10629.	GM11518.	0.466
DsecGM10629	DsecGM19196	B4I411	B4I9P1	GM10629.	GM19196.	0.597
DsecGM10629	DsecGM19198	B4I411	B4I9P3	GM10629.	GM19198.	0.597
DsecGM10629	DsecGM19986	B4I411	B4HMK9	GM10629.	GM19986.	0.970
DsecGM10629	DsecGM20273	B4I411	B4HQJ5	GM10629.	GM20273.	0.620
DsecGM11205	DsecGM11474	B4IKX8	B4IE13	GM11205.	GM11474.	0.613
DsecGM11474	DsecGM11205	B4IE13	B4IKX8	GM11474.	GM11205.	0.613
DsecGM11474	DsecGM11518	B4IE13	B4IGL9	GM11474.	GM11518.	0.752
DsecGM11518	DsecGM10629	B4IGL9	B4I411	GM11518.	GM10629.	0.466
DsecGM11518	DsecGM11474	B4IGL9	B4IE13	GM11518.	GM11474.	0.752
DsecGM11518	DsecGM14376	B4IGL9	B4HVN6	GM11518.	GM14376.	0.760
DsecGM11518	DsecGM21946	B4IGL9	B4HPE1	GM11518.	GM21946.	0.647
DsecGM11518	DsecGM24980	B4IGL9	B4HIX3	GM11518.	GM24980.	0.472
DsecGM11518	DsecGM24981	B4IGL9	B4HIX2	GM11518.	GM24981.	0.472
DsecGM12865	DsecGM16771	B4HZM7	B4ID22	GM12865.	GM16771.	0.936
DsecGM12865	DsecGM19196	B4HZM7	B4I9P1	GM12865.	GM19196.	0.423
DsecGM12865	DsecGM19198	B4HZM7	B4I9P3	GM12865.	GM19198.	0.423
DsecGM12865	DsecGM20273	B4HZM7	B4HQJ5	GM12865.	GM20273.	0.986
DsecGM12865	DsecGM23242	B4HZM7	B4IL88	GM12865.	GM23242.	0.475