159 items (Drosophila simulans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DsimGD20641	CG6913 protein. (195 aa)
	DsimGD11969	GD11969. (119 aa)
	DsimGD15288	GD15288. (435 aa)
	DsimGD15370	GD15370. (272 aa)
	DsimGD15372	GD15372. (210 aa)
	DsimGD15457	GD15457. (120 aa)
	DsimGD17621	GD17621. (213 aa)
	DsimGD15118	GD15118. (266 aa)
	DsimGD24607	GD24607. (375 aa)
	DsimGD23783	GD23783. (888 aa)
	DsimGD23340	GD23340. (665 aa)
	DsimGD23341	GD23341. (581 aa)
	DsimGD22137	GD22137. (469 aa)
	DsimGD22133	GD22133. (613 aa)
	DsimGD23843	GD23843. (147 aa)
	DsimGD23844	POU domain protein. (601 aa)
	DsimGD23847	POU domain protein. (889 aa)
	DsimGD24333	GD24333. (954 aa)
	DsimGD24341	GD24341. (1019 aa)
	DsimGD22568	Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (771 aa)
	DsimGD23921	GD23921. (1603 aa)
	DsimGD22979	GD22979. (297 aa)
	DsimGD23020	GD23020. (410 aa)
	DsimGD24004	GD24004. (467 aa)
	DsimGD21956	GD21956. (548 aa)
	DsimGD21953	GD21953. (390 aa)
	DsimGD21910	GD21910. (850 aa)
	DsimGD23563	GD23563. (489 aa)
	DsimGD23564	GD23564. (71 aa)
	DsimGD22883	GD22883. (620 aa)
	DsimGD24118	GD24118. (232 aa)
	DsimGD22293	GD22293. (241 aa)
	DsimGD22284	GD22284. (174 aa)
	DsimGD23678	GD23678. (844 aa)
	DsimGD21828	GD21828. (197 aa)
	DsimGD21824	GD21824. (475 aa)
	DsimGD21801	GD21801. (534 aa)
	DsimGD22270	GD22270. (176 aa)
	DsimGD22269	GD22269. (281 aa)
	DsimGD23691	GD23691. (314 aa)
	DsimGD23692	GD23692. (354 aa)
	DsimGD21780	GD21780. (438 aa)
	DsimGD21779	GD21779. (122 aa)
	DsimGD22744	GD22744. (576 aa)
	DsimGD22743	GD22743. (391 aa)
	DsimGD21734	GD21734. (429 aa)
	DsimGD23260	GD23260. (322 aa)
	DsimGD23776	GD23776. (1270 aa)
	DsimGD22176	GD22176. (1265 aa)
	DsimGD10745	GD10745. (844 aa)
	DsimGD10771	GD10771. (2580 aa)
	DsimGD11819	GD11819. (199 aa)
	DsimGD24979	GD24979. (596 aa)
	DsimGD11322	GD11322. (697 aa)
	DsimGD11852	GD11852. (449 aa)
	DsimGD11901	GD11901. (327 aa)
	DsimGD10352	GD10352. (469 aa)
	DsimGD11918	GD11918. (427 aa)
	DsimGD10477	GD10477. (129 aa)
	DsimGD10478	GD10478. (165 aa)
	DsimGD10482	GD10482. (115 aa)
	DsimGD10533	GD10533. (292 aa)
	DsimGD10534	GD10534. (199 aa)
	DsimGD25245	GD25245. (417 aa)
	DsimGD11547	GD11547. (903 aa)
	DsimGD25656	GD25656. (633 aa)
	DsimGD25167	GD25167. (500 aa)
	DsimGD25551	GD25551. (188 aa)
	twi	Twist. (476 aa)
	DsimGD12667	GD12667. (540 aa)
	kni	Kni. (378 aa)
	DsimGD12161	GD12161. (392 aa)
	DsimGD13937	GD13937. (257 aa)
	DsimGD13944	GD13944. (463 aa)
	DsimGD12630	GD12630. (385 aa)
	DsimGD12614	GD12614. (644 aa)
	DsimGD12117	GD12117. (491 aa)
	DsimGD12586	GD12586. (319 aa)
	DsimGD14043	GD14043. (321 aa)
	DsimGD13571	GD13571. (199 aa)
	DsimGD13584	GD13584. (469 aa)
	DsimGD13495	GD13495. (1066 aa)
	DsimGD13634	GD13634. (213 aa)
	DsimGD12943	GD12943. (582 aa)
	DsimGD13657	GD13657. (194 aa)
	DsimGD13658	GD13658. (553 aa)
	DsimGD14703	GD14703. (398 aa)
	DsimGD12837	GD12837. (555 aa)
	DsimGD12327	GD12327. (1024 aa)
	DsimGD13784	GD13784. (278 aa)
	DsimGD12721	GD12721. (635 aa)
	DsimGD12719	GD12719. (666 aa)
	DsimGD12236	GD12236. (406 aa)
	DsimGD14388	GD14388. (597 aa)
	DsimGD14390	GD14390. (687 aa)
	DsimGD14396	GD14396. (641 aa)
	DsimGD21559	GD21559. (531 aa)
	DsimGD16425	GD16425. (363 aa)
	DsimGD18809	GD18809. (680 aa)
	DsimGD21183	GD21183. (713 aa)
	DsimGD20197	GD20197. (445 aa)
	DsimGD19684	GD19684. (297 aa)
	DsimGD20718	GD20718. (487 aa)
	Abd-B	Abd-B. (519 aa)
	DsimGD20268	GD20268. (631 aa)
	DsimUbx	Ultrabithorax. (338 aa)
	DsimGD20769	GD20769. (123 aa)
	DsimGD18632	GD18632. (866 aa)
	DsimGD19066	GD19066. (736 aa)
	DsimGD19065	GD19065. (83 aa)
	DsimGD19064	GD19064. (696 aa)
	DsimGD21351	GD21351. (518 aa)
	DsimGD19533	GD19533. (189 aa)
	DsimGD19532	GD19532. (539 aa)
	DsimGD18530	GD18530. (284 aa)
	DsimGD20889	GD20889. (292 aa)
	DsimGD18030	GD18030. (168 aa)
	DsimGD18028	GD18028. (510 aa)
	DsimGD19525	GD19525. (789 aa)
	DsimGD19524	GD19524. (252 aa)
	DsimGD19522	GD19522. (351 aa)
	bcd	Bicoid. (489 aa)
	DsimGD19895	GD19895. (582 aa)
	DsimGD19518	GD19518. (463 aa)
	ftz	Ftz. (413 aa)
	DsimGD19515	GD19515. (374 aa)
	DsimGD19915	GD19915. (251 aa)
	DsimGD21441	GD21441. (514 aa)
	DsimGD19430	GD19430. (339 aa)
	DsimGD18937	GD18937. (496 aa)
	DsimGD18444	GD18444. (158 aa)
	DsimGD19422	GD19422. (116 aa)
	tin	Tin. (208 aa)
	DsimGD21550	GD21550. (452 aa)
	DsimGD21552	GD21552. (592 aa)
	DsimGD24406	GD24406. (2054 aa)
	DsimGD24421	GD24421. (680 aa)
	DsimGD17048	GD17048. (678 aa)
	DsimGD17495	GD17495. (657 aa)
	run	Runt. (510 aa)
	DsimGD16690	GD16690. (101 aa)
	DsimGD16691	GD16691. (672 aa)
	DsimGD16284	GD16284. (267 aa)
	DsimGD16257	GD16257. (651 aa)
	DsimGD16737	GD16737. (673 aa)
	DsimGD17261	GD17261. (376 aa)
	DsimGD16839	GD16839. (691 aa)
	DsimGD15668	GD15668. (547 aa)
	DsimGD15666	GD15666. (638 aa)
	DsimGD17364	GD17364. (138 aa)
	DsimGD17400	GD17400. (371 aa)
	DsimGD17401	GD17401. (106 aa)
	DsimGD16964	GD16964. (793 aa)
	sc	Scute. (334 aa)
	DsimGD16504	GD16504. (466 aa)
	DsimGD16514	GD16514. (723 aa)
	DsimGD15564	GD15564. (572 aa)
	DsimGD15563	GD15563. (326 aa)
	l(1)sc	Lethal of scute. (257 aa)

Your Current Organism:

Drosophila simulans

NCBI taxonomy Id: 7240
Other names: D. simulans

Send network to Cytoscape

Export your current network:

... as a bitmap image:

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file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

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same PNG format, but at higher resolution

... as a vector graphic:

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Abd-B	DsimGD13495	B4QWE8	B4QLX2	Abd-B.	GD13495.	0.507
Abd-B	DsimGD15118	B4QWE8	B4NT90	Abd-B.	GD15118.	0.416
Abd-B	DsimGD17261	B4QWE8	B4R5K9	Abd-B.	GD17261.	0.997
Abd-B	DsimGD19515	B4QWE8	B4QYY1	Abd-B.	GD19515.	0.719
Abd-B	DsimGD19518	B4QWE8	B4QYX7	Abd-B.	GD19518.	0.435
Abd-B	DsimGD19895	B4QWE8	B4QYX5	Abd-B.	GD19895.	0.697
Abd-B	DsimGD20268	B4QWE8	B4QWF0	Abd-B.	GD20268.	0.727
Abd-B	DsimGD20718	B4QWE8	B4QV74	Abd-B.	GD20718.	0.839
Abd-B	DsimGD22979	B4QWE8	B4Q5N8	Abd-B.	GD22979.	0.453
Abd-B	DsimGD23776	B4QWE8	B4QAD9	Abd-B.	GD23776.	0.588
Abd-B	DsimUbx	B4QWE8	B4QWF6	Abd-B.	Ultrabithorax.	0.746
Abd-B	ftz	B4QWE8	B4QYX9	Abd-B.	Ftz.	0.562
Abd-B	twi	B4QWE8	B4QI46	Abd-B.	Twist.	0.411
DsimGD10352	DsimGD17400	B4QCN8	B4R708	GD10352.	GD17400.	0.918
DsimGD10352	DsimGD20197	B4QCN8	B4QUI8	GD10352.	GD20197.	0.649
DsimGD10352	DsimGD24979	B4QCN8	B4QBH1	GD10352.	GD24979.	0.993
DsimGD10352	DsimGD25656	B4QCN8	B4QFY9	GD10352.	GD25656.	0.694
DsimGD10477	DsimGD12719	B4QE95	B4QRA5	GD10477.	GD12719.	0.602
DsimGD10477	DsimGD18530	B4QE95	B4QYN0	GD10477.	GD18530.	0.678
DsimGD10477	DsimGD20718	B4QE95	B4QV74	GD10477.	GD20718.	0.531