19 items (Drosophila simulans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DsimGD24341	GD24341. (1019 aa)
	DsimGD22568	Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (771 aa)
	DsimGD22979	GD22979. (297 aa)
	DsimGD21910	GD21910. (850 aa)
	DsimGD10745	GD10745. (844 aa)
	DsimGD10477	GD10477. (129 aa)
	DsimGD10478	GD10478. (165 aa)
	DsimGD10482	GD10482. (115 aa)
	DsimGD10533	GD10533. (292 aa)
	DsimGD10534	GD10534. (199 aa)
	DsimGD12161	GD12161. (392 aa)
	DsimGD12721	GD12721. (635 aa)
	DsimGD12719	GD12719. (666 aa)
	DsimGD12236	GD12236. (406 aa)
	DsimGD21183	GD21183. (713 aa)
	DsimGD18444	GD18444. (158 aa)
	DsimGD24421	GD24421. (680 aa)
	DsimGD16257	GD16257. (651 aa)
	DsimGD16737	GD16737. (673 aa)

Your Current Organism:

Drosophila simulans

NCBI taxonomy Id: 7240
Other names: D. simulans

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same PNG format, but at higher resolution

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DsimGD10477	DsimGD12719	B4QE95	B4QRA5	GD10477.	GD12719.	0.602
DsimGD10477	DsimGD21183	B4QE95	B4QUC7	GD10477.	GD21183.	0.404
DsimGD10477	DsimGD21910	B4QE95	B4Q718	GD10477.	GD21910.	0.703
DsimGD10477	DsimGD22568	B4QE95	B4Q4Y0	GD10477.	Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family.	0.956
DsimGD10477	DsimGD24421	B4QE95	B4R2I7	GD10477.	GD24421.	0.517
DsimGD10478	DsimGD12719	B4QE97	B4QRA5	GD10478.	GD12719.	0.602
DsimGD10478	DsimGD21183	B4QE97	B4QUC7	GD10478.	GD21183.	0.404
DsimGD10478	DsimGD21910	B4QE97	B4Q718	GD10478.	GD21910.	0.703
DsimGD10478	DsimGD22568	B4QE97	B4Q4Y0	GD10478.	Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family.	0.956
DsimGD10478	DsimGD24421	B4QE97	B4R2I7	GD10478.	GD24421.	0.517
DsimGD10482	DsimGD12719	B4QEA5	B4QRA5	GD10482.	GD12719.	0.602
DsimGD10482	DsimGD21183	B4QEA5	B4QUC7	GD10482.	GD21183.	0.404
DsimGD10482	DsimGD21910	B4QEA5	B4Q718	GD10482.	GD21910.	0.703
DsimGD10482	DsimGD22568	B4QEA5	B4Q4Y0	GD10482.	Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family.	0.956
DsimGD10482	DsimGD24421	B4QEA5	B4R2I7	GD10482.	GD24421.	0.517
DsimGD10533	DsimGD12719	B4QF90	B4QRA5	GD10533.	GD12719.	0.720
DsimGD10533	DsimGD16257	B4QF90	B4R4Z4	GD10533.	GD16257.	0.710
DsimGD10533	DsimGD16737	B4QF90	B4R4Z5	GD10533.	GD16737.	0.713
DsimGD10533	DsimGD21183	B4QF90	B4QUC7	GD10533.	GD21183.	0.506
DsimGD10533	DsimGD21910	B4QF90	B4Q718	GD10533.	GD21910.	0.586