20 items (Drosophila simulans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DsimGD11941	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
	DsimGD24352	GD24352. (159 aa)
	DsimGD22414	GD22414; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	DsimGD23645	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (218 aa)
	DsimGD21790	GD21790. (111 aa)
	DsimGD22706	GD22706; Belongs to the universal ribosomal protein uL15 family. (149 aa)
	DsimGD25466	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (177 aa)
	DsimGD24974	GD24974. (51 aa)
	DsimGD11455	GD11455; Belongs to the universal ribosomal protein uL5 family. (184 aa)
	DsimGD25696	GD25696; Belongs to the universal ribosomal protein uS12 family. (143 aa)
	DsimGD11583	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (76 aa)
	DsimGD25118	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (131 aa)
	DsimGD13338	GD13338. (144 aa)
	DsimGD14780	GD14780. (149 aa)
	DsimGD18739	GD18739; Belongs to the universal ribosomal protein uL3 family. (416 aa)
	DsimGD19617	GD19617. (157 aa)
	DsimGD19800	GD19800; Belongs to the universal ribosomal protein uL13 family. (205 aa)
	sta	Stubarista. (133 aa)
	DsimGD16468	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (112 aa)
	RpL32	60S ribosomal protein L32; Belongs to the eukaryotic ribosomal protein eL32 family. (134 aa)

Your Current Organism:

Drosophila simulans

NCBI taxonomy Id: 7240
Other names: D. simulans

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DsimGD11455	DsimGD11583	B4QE29	B4QG12	GD11455; Belongs to the universal ribosomal protein uL5 family.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.999
DsimGD11455	DsimGD11941	B4QE29	B4NTI4	GD11455; Belongs to the universal ribosomal protein uL5 family.	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.999
DsimGD11455	DsimGD13338	B4QE29	B4QP55	GD11455; Belongs to the universal ribosomal protein uL5 family.	GD13338.	0.999
DsimGD11455	DsimGD14780	B4QE29	B4QPX8	GD11455; Belongs to the universal ribosomal protein uL5 family.	GD14780.	0.999
DsimGD11455	DsimGD16468	B4QE29	B4R7G1	GD11455; Belongs to the universal ribosomal protein uL5 family.	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.	0.999
DsimGD11455	DsimGD18739	B4QE29	B4QU67	GD11455; Belongs to the universal ribosomal protein uL5 family.	GD18739; Belongs to the universal ribosomal protein uL3 family.	0.999
DsimGD11455	DsimGD19617	B4QE29	B4QWV8	GD11455; Belongs to the universal ribosomal protein uL5 family.	GD19617.	0.999
DsimGD11455	DsimGD19800	B4QE29	B4QWY9	GD11455; Belongs to the universal ribosomal protein uL5 family.	GD19800; Belongs to the universal ribosomal protein uL13 family.	0.999
DsimGD11455	DsimGD21790	B4QE29	B4Q9E1	GD11455; Belongs to the universal ribosomal protein uL5 family.	GD21790.	0.999
DsimGD11455	DsimGD22414	B4QE29	B4Q6R5	GD11455; Belongs to the universal ribosomal protein uL5 family.	GD22414; Belongs to the universal ribosomal protein uS15 family.	0.999
DsimGD11455	DsimGD22706	B4QE29	B4QA80	GD11455; Belongs to the universal ribosomal protein uL5 family.	GD22706; Belongs to the universal ribosomal protein uL15 family.	0.999
DsimGD11455	DsimGD23645	B4QE29	B4Q8B3	GD11455; Belongs to the universal ribosomal protein uL5 family.	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.	0.999
DsimGD11455	DsimGD24352	B4QE29	B4Q4X0	GD11455; Belongs to the universal ribosomal protein uL5 family.	GD24352.	0.999
DsimGD11455	DsimGD24974	B4QE29	B4QBI5	GD11455; Belongs to the universal ribosomal protein uL5 family.	GD24974.	0.999
DsimGD11455	DsimGD25118	B4QE29	B4QHJ7	GD11455; Belongs to the universal ribosomal protein uL5 family.	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	0.999
DsimGD11455	DsimGD25466	B4QE29	B4QB93	GD11455; Belongs to the universal ribosomal protein uL5 family.	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.	0.999
DsimGD11455	DsimGD25696	B4QE29	B4QFE2	GD11455; Belongs to the universal ribosomal protein uL5 family.	GD25696; Belongs to the universal ribosomal protein uS12 family.	0.999
DsimGD11455	RpL32	B4QE29	P61128	GD11455; Belongs to the universal ribosomal protein uL5 family.	60S ribosomal protein L32; Belongs to the eukaryotic ribosomal protein eL32 family.	0.999
DsimGD11455	sta	B4QE29	B4R2Z5	GD11455; Belongs to the universal ribosomal protein uL5 family.	Stubarista.	0.999
DsimGD11583	DsimGD11455	B4QG12	B4QE29	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	GD11455; Belongs to the universal ribosomal protein uL5 family.	0.999