(95 nodes) Transport along microtubule network (Drosophila simulans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DsimGD14464	GD14464. (614 aa)
	DsimGD15343	GD15343. (323 aa)
	DsimGD15214	GD15214. (407 aa)
	DsimGD17622	GD17622. (516 aa)
	DsimGD17567	GD17567. (451 aa)
	DsimGD11925	GD11925. (80 aa)
	DsimGD24757	GD24757. (308 aa)
	Dsimg	Garnet. (591 aa)
	DsimGD24517	GD24517. (105 aa)
	DsimGD24858	GD24858. (777 aa)
	DsimGD24454	GD24454; Belongs to the actin family. (378 aa)
	DsimGD22919	GD22919. (241 aa)
	DsimGD20451	GD20451. (241 aa)
	DsimGD22105	GD22105. (104 aa)
	DsimGD22104	GD22104. (85 aa)
	DsimGD23863	GD23863. (660 aa)
	DsimGD21636	GD21636. (851 aa)
	DsimGD22566	GD22566. (410 aa)
	DsimGD23428	GD23428. (1201 aa)
	DsimGD23449	GD23449. (139 aa)
	DsimGD23450	GD23450. (283 aa)
	DsimGD23451	GD23451. (693 aa)
	DsimGD23985	GD23985. (189 aa)
	DsimGD22951	GD22951. (414 aa)
	DsimGD23067	GD23067. (1012 aa)
	DsimGD22905	GD22905. (109 aa)
	DsimGD23605	GD23605. (368 aa)
	DsimGD23640	GD23640. (699 aa)
	DsimGD21850	GD21850. (4107 aa)
	DsimGD21825	GD21825. (420 aa)
	DsimGD23241	GD23241. (547 aa)
	DsimGD23276	GD23276. (240 aa)
	DsimGD25416	GD25416. (1035 aa)
	DsimGD10361	GD10361. (131 aa)
	DsimGD10311	GD10311. (223 aa)
	DsimGD11456	GD11456. (681 aa)
	DsimGD25318	GD25318. (680 aa)
	DsimGD10466	GD10466. (349 aa)
	DsimGD10467	GD10467. (179 aa)
	DsimGD10485	GD10485; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1720 aa)
	DsimGD25270	GD25270. (105 aa)
	DsimGD25703	GD25703. (2258 aa)
	DsimGD10607	GD10607. (380 aa)
	DsimGD25614	GD25614; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1913 aa)
	Lis-1	Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes. (411 aa)
	DsimGD11172	GD11172. (62 aa)
	DsimGD25104	GD25104. (1815 aa)
	DsimGD10050	GD10050. (1100 aa)
	DsimGD25552	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (991 aa)
	DsimGD25516	GD25516; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1753 aa)
	DsimGD14461	GD14461. (317 aa)
	DsimGD14462	GD14462. (941 aa)
	DsimGD13029	GD13029. (1225 aa)
	DsimGD14555	GD14555. (2136 aa)
	DsimGD12991	GD12991. (1139 aa)
	DsimGD13597	GD13597. (621 aa)
	DsimGD13444	GD13444. (244 aa)
	DsimGD13441	GD13441. (2891 aa)
	DsimGD13668	GD13668. (708 aa)
	DsimGD12431	GD12431. (76 aa)
	DsimGD14225	GD14225. (340 aa)
	DsimGD14330	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (767 aa)
	DsimGD13229	GD13229. (2433 aa)
	DsimGD13231	GD13231. (848 aa)
	DsimGD13203	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (676 aa)
	DsimGD12696	GD12696. (346 aa)
	DsimGD12695	GD12695; Belongs to the protein kinase superfamily. (261 aa)
	DsimGD19365	GD19365. (741 aa)
	DsimGD19364	GD19364. (1624 aa)
	DsimGD18855	GD18855. (376 aa)
	DsimGD18328	GD18328. (824 aa)
	DsimGD21583	GD21583. (169 aa)
	DsimGD18306	GD18306; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1314 aa)
	DsimGD19225	GD19225. (111 aa)
	DsimGD20735	GD20735. (682 aa)
	DsimGD18602	GD18602. (320 aa)
	DsimGD18075	GD18075; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1220 aa)
	DsimGD19043	GD19043. (570 aa)
	DsimGD18515	GD18515; Belongs to the small GTPase superfamily. Arf family. (186 aa)
	DsimGD18952	GD18952. (856 aa)
	DsimGD20937	GD20937. (177 aa)
	DsimGD19996	GD19996. (205 aa)
	DsimGD20029	GD20029. (81 aa)
	DsimGD24423	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (415 aa)
	Dsimfutsch	Futsch. (886 aa)
	DsimGD16559	GD16559. (531 aa)
	DsimGD15994	GD15994. (1041 aa)
	DsimGD15550	GD15550. (167 aa)
	DsimGD15962	GD15962. (96 aa)
	DsimGD15961	GD15961. (154 aa)
	Dsim_GD16621	EG:100G7.6. (502 aa)
	DsimGD16666	GD16666. (235 aa)
	DsimGD15877	GD15877. (260 aa)
	DsimGD15823	GD15823; Belongs to the perilipin family. (336 aa)
	DsimGD16083	GD16083. (190 aa)

Your Current Organism:

Drosophila simulans

NCBI taxonomy Id: 7240
Other names: D. simulans

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DsimGD10050	DsimGD12431	B4QHR4	B4QND9	GD10050.	GD12431.	0.700
DsimGD10050	DsimGD19364	B4QHR4	B4QS07	GD10050.	GD19364.	0.465
DsimGD10050	DsimGD19365	B4QHR4	B4QS06	GD10050.	GD19365.	0.465
DsimGD10050	DsimGD21636	B4QHR4	B4Q4E6	GD10050.	GD21636.	0.425
DsimGD10050	DsimGD22566	B4QHR4	B4Q4Y1	GD10050.	GD22566.	0.470
DsimGD10361	DsimGD12991	B4QC35	B4QLP4	GD10361.	GD12991.	0.880
DsimGD10361	DsimGD13203	B4QC35	B4QRJ6	GD10361.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.804
DsimGD10361	DsimGD13444	B4QC35	B4QMJ7	GD10361.	GD13444.	0.814
DsimGD10361	DsimGD13668	B4QC35	B4QN35	GD10361.	GD13668.	0.774
DsimGD10361	DsimGD14330	B4QC35	B4QQN1	GD10361.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.551
DsimGD10361	DsimGD15214	B4QC35	B4NSM1	GD10361.	GD15214.	0.756
DsimGD10361	DsimGD15994	B4QC35	B4R2S8	GD10361.	GD15994.	0.713
DsimGD10361	DsimGD17567	B4QC35	B4NT46	GD10361.	GD17567.	0.495
DsimGD10361	DsimGD17622	B4QC35	B4NSZ9	GD10361.	GD17622.	0.774
DsimGD10361	DsimGD18952	B4QC35	B4QZW9	GD10361.	GD18952.	0.974
DsimGD10361	DsimGD19043	B4QC35	B4QXV4	GD10361.	GD19043.	0.808
DsimGD10361	DsimGD19364	B4QC35	B4QS07	GD10361.	GD19364.	0.459
DsimGD10361	DsimGD19365	B4QC35	B4QS06	GD10361.	GD19365.	0.459
DsimGD10361	DsimGD21636	B4QC35	B4Q4E6	GD10361.	GD21636.	0.961
DsimGD10361	DsimGD21825	B4QC35	B4Q8V7	GD10361.	GD21825.	0.957