(17 nodes) Female meiosis chromosome segregation network (Drosophila simulans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	mei-218	Mei-218. (236 aa)
	DsimGD22103	GD22103. (261 aa)
	DsimGD22953	GD22953; Belongs to the ubiquitin-conjugating enzyme family. (159 aa)
	DsimGD23164	GD23164. (274 aa)
	DsimGD25444	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (628 aa)
	DsimGD14056	GD14056. (1011 aa)
	DsimGD14744	GD14744. (733 aa)
	DsimGD19180	GD19180. (561 aa)
	DsimGD19138	GD19138. (890 aa)
	DsimGD18552	GD18552. (177 aa)
	DsimGD18551	GD18551. (796 aa)
	DsimGD18550	GD18550. (312 aa)
	mei-9	Mei-9. (602 aa)
	DsimGD16300	GD16300. (85 aa)
	DsimGD17284	GD17284. (2578 aa)
	DsimGD15734	Anoctamin. (646 aa)
	DsimGD24835	GD24835; Belongs to the PI3/PI4-kinase family. (270 aa)

Your Current Organism:

Drosophila simulans

NCBI taxonomy Id: 7240
Other names: D. simulans

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DsimGD14056	DsimGD14744	B4QLI6	B4QPE4	GD14056.	GD14744.	0.657
DsimGD14056	DsimGD16300	B4QLI6	B4R4H0	GD14056.	GD16300.	0.650
DsimGD14056	mei-9	B4QLI6	B4R4G8	GD14056.	Mei-9.	0.507
DsimGD14744	DsimGD14056	B4QPE4	B4QLI6	GD14744.	GD14056.	0.657
DsimGD14744	DsimGD16300	B4QPE4	B4R4H0	GD14744.	GD16300.	0.659
DsimGD14744	DsimGD17284	B4QPE4	B4R5T8	GD14744.	GD17284.	0.986
DsimGD14744	DsimGD24835	B4QPE4	B4NUJ1	GD14744.	GD24835; Belongs to the PI3/PI4-kinase family.	0.616
DsimGD14744	mei-9	B4QPE4	B4R4G8	GD14744.	Mei-9.	0.577
DsimGD16300	DsimGD14056	B4R4H0	B4QLI6	GD16300.	GD14056.	0.650
DsimGD16300	DsimGD14744	B4R4H0	B4QPE4	GD16300.	GD14744.	0.659
DsimGD16300	DsimGD17284	B4R4H0	B4R5T8	GD16300.	GD17284.	0.903
DsimGD16300	DsimGD24835	B4R4H0	B4NUJ1	GD16300.	GD24835; Belongs to the PI3/PI4-kinase family.	0.542
DsimGD16300	mei-218	B4R4H0	B4R6C9	GD16300.	Mei-218.	0.860
DsimGD17284	DsimGD14744	B4R5T8	B4QPE4	GD17284.	GD14744.	0.986
DsimGD17284	DsimGD16300	B4R5T8	B4R4H0	GD17284.	GD16300.	0.903
DsimGD17284	DsimGD24835	B4R5T8	B4NUJ1	GD17284.	GD24835; Belongs to the PI3/PI4-kinase family.	0.869
DsimGD17284	mei-218	B4R5T8	B4R6C9	GD17284.	Mei-218.	0.810
DsimGD17284	mei-9	B4R5T8	B4R4G8	GD17284.	Mei-9.	0.850
DsimGD18550	DsimGD19138	B4QY14	B4QWB8	GD18550.	GD19138.	0.996
DsimGD18551	DsimGD19138	B4QY13	B4QWB8	GD18551.	GD19138.	0.996