45 items (Drosophila simulans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DsimGD15262	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (256 aa)
	DsimGD12023	GD12023. (92 aa)
	DsimGD12014	GD12014. (128 aa)
	DsimGD16468	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (112 aa)
	DsimGD16190	GD16190. (271 aa)
	DsimGD18147	GD18147. (162 aa)
	DsimGD18180	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (135 aa)
	DsimGD18739	GD18739; Belongs to the universal ribosomal protein uL3 family. (416 aa)
	DsimGD16739	GD16739. (123 aa)
	DsimGD21356	GD21356. (401 aa)
	DsimGD19800	GD19800; Belongs to the universal ribosomal protein uL13 family. (205 aa)
	DsimGD19617	GD19617. (157 aa)
	DsimGD20801	GD20801. (168 aa)
	DsimGD14333	GD14333. (217 aa)
	DsimGD14780	GD14780. (149 aa)
	DsimGD13338	GD13338. (144 aa)
	DsimGD13692	GD13692. (256 aa)
	DsimGD13453	GD13453; Belongs to the universal ribosomal protein uL23 family. (277 aa)
	DsimGD14108	GD14108. (179 aa)
	DsimGD12046	GD12046. (218 aa)
	DsimGD15019	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (317 aa)
	DsimGD13082	GD13082. (169 aa)
	DsimGD25071	GD25071. (311 aa)
	DsimGD11716	GD11716; Belongs to the universal ribosomal protein uL14 family. (140 aa)
	DsimGD11208	GD11208; Belongs to the eukaryotic ribosomal protein P1/P2 family. (113 aa)
	DsimGD10666	GD10666. (124 aa)
	DsimGD11583	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (76 aa)
	DsimGD11455	GD11455; Belongs to the universal ribosomal protein uL5 family. (184 aa)
	DsimGD24903	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (203 aa)
	DsimGD24974	GD24974. (51 aa)
	DsimGD11830	GD11830; Belongs to the universal ribosomal protein uL11 family. (165 aa)
	DsimGD25466	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (177 aa)
	DsimGD22204	GD22204. (190 aa)
	DsimGD22706	GD22706; Belongs to the universal ribosomal protein uL15 family. (149 aa)
	DsimGD21790	GD21790. (111 aa)
	DsimGD23662	GD23662. (252 aa)
	DsimGD23645	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (218 aa)
	DsimGD22396	GD22396. (683 aa)
	DsimGD20660	GD20660. (191 aa)
	DsimGD23023	GD23023; Belongs to the eukaryotic ribosomal protein P1/P2 family. (112 aa)
	DsimGD24352	GD24352. (159 aa)
	DsimGD22063	GD22063. (155 aa)
	DsimGD23812	GD23812. (257 aa)
	DsimGD15528	GD15528. (86 aa)
	DsimGD11941	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)

Your Current Organism:

Drosophila simulans

NCBI taxonomy Id: 7240
Other names: D. simulans

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DsimGD10666	DsimGD11208	B4QHA9	B4QI10	GD10666.	GD11208; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.998
DsimGD10666	DsimGD11455	B4QHA9	B4QE29	GD10666.	GD11455; Belongs to the universal ribosomal protein uL5 family.	0.999
DsimGD10666	DsimGD11583	B4QHA9	B4QG12	GD10666.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.999
DsimGD10666	DsimGD11716	B4QHA9	B4QI17	GD10666.	GD11716; Belongs to the universal ribosomal protein uL14 family.	0.999
DsimGD10666	DsimGD11830	B4QHA9	B4QBI4	GD10666.	GD11830; Belongs to the universal ribosomal protein uL11 family.	0.999
DsimGD10666	DsimGD11941	B4QHA9	B4NTI4	GD10666.	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.999
DsimGD10666	DsimGD12014	B4QHA9	B4NRW4	GD10666.	GD12014.	0.998
DsimGD10666	DsimGD12023	B4QHA9	B4NRX6	GD10666.	GD12023.	0.999
DsimGD10666	DsimGD12046	B4QHA9	B4QLV8	GD10666.	GD12046.	0.999
DsimGD10666	DsimGD13082	B4QHA9	B4QKA8	GD10666.	GD13082.	0.989
DsimGD10666	DsimGD13338	B4QHA9	B4QP55	GD10666.	GD13338.	0.999
DsimGD10666	DsimGD13453	B4QHA9	B4QMI6	GD10666.	GD13453; Belongs to the universal ribosomal protein uL23 family.	0.999
DsimGD10666	DsimGD13692	B4QHA9	B4QNJ4	GD10666.	GD13692.	0.999
DsimGD10666	DsimGD14108	B4QHA9	B4QM50	GD10666.	GD14108.	0.999
DsimGD10666	DsimGD14333	B4QHA9	B4QQN5	GD10666.	GD14333.	0.999
DsimGD10666	DsimGD14780	B4QHA9	B4QPX8	GD10666.	GD14780.	0.999
DsimGD10666	DsimGD15019	B4QHA9	B4QKR0	GD10666.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.998
DsimGD10666	DsimGD15262	B4QHA9	B4NSC5	GD10666.	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.991
DsimGD10666	DsimGD15528	B4QHA9	B4NVZ7	GD10666.	GD15528.	0.989
DsimGD10666	DsimGD16190	B4QHA9	B4R5M2	GD10666.	GD16190.	0.999