(52 nodes) Imaginal disc-derived wing hair organization network (Drosophila simulans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	R	Roughened. (184 aa)
	DsimGD11990	GD11990. (185 aa)
	DsimGD11989	GD11989. (355 aa)
	DsimGD15390	GD15390. (298 aa)
	DsimGD20451	GD20451. (241 aa)
	DsimGD23059	GD23059. (185 aa)
	DsimGD23334	GD23334. (728 aa)
	DsimGD23006	GD23006. (1098 aa)
	DsimGD23007	GD23007. (1088 aa)
	DsimGD22944	GD22944. (3038 aa)
	DsimGD23509	GD23509. (505 aa)
	DsimGD21942	GD21942. (956 aa)
	DsimGD21863	GD21863. (890 aa)
	DsimGD22718	GD22718. (3385 aa)
	DsimGD10750	GD10750; Belongs to the G-protein coupled receptor 2 family. (3463 aa)
	DsimGD25955	GD25955. (927 aa)
	DsimGD10791	GD10791. (395 aa)
	DsimGD24977	GD24977; Belongs to the actin-binding proteins ADF family. (148 aa)
	DsimGD11436	GD11436. (1393 aa)
	DsimGD10466	GD10466. (349 aa)
	DsimGD10467	GD10467. (179 aa)
	DsimGD11158	GD11158. (192 aa)
	DsimGD10742	GD10742. (354 aa)
	DsimGD14448	GD14448. (608 aa)
	DsimGD14451	GD14451. (1647 aa)
	DsimGD13977	GD13977. (250 aa)
	DsimGD13979	GD13979. (114 aa)
	DsimGD14489	GD14489; Belongs to the G-protein coupled receptor Fz/Smo family. (415 aa)
	DsimGD15041	GD15041. (98 aa)
	DsimGD14592	GD14592. (1147 aa)
	DsimGD13592	GD13592. (208 aa)
	DsimGD13487	GD13487. (192 aa)
	DsimGD12905	GD12905. (1460 aa)
	DsimGD12904	GD12904. (375 aa)
	DsimGD12903	GD12903. (1459 aa)
	DsimGD13264	GD13264. (631 aa)
	DsimGD12737	GD12737. (289 aa)
	DsimGD12736	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (744 aa)
	DsimGD12245	GD12245; Belongs to the protein kinase superfamily. (459 aa)
	DsimGD14880	GD14880. (869 aa)
	DsimGD21289	GD21289. (2647 aa)
	DsimGD18602	GD18602. (320 aa)
	DsimGD21343	GD21343. (184 aa)
	DsimGD15948	GD15948. (516 aa)
	DsimGD15924	GD15924. (964 aa)
	sqh	Sqh. (174 aa)
	DsimGD15741	GD15741. (1032 aa)
	DsimGD15700	GD15700. (407 aa)
	DsimGD15701	GD15701. (428 aa)
	DsimGD17341	GD17341. (829 aa)
	DsimGD16922	GD16922. (1030 aa)
	DsimGD17456	GD17456. (191 aa)

Your Current Organism:

Drosophila simulans

NCBI taxonomy Id: 7240
Other names: D. simulans

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DsimGD10466	DsimGD10750	B4QE77	B4QAL9	GD10466.	GD10750; Belongs to the G-protein coupled receptor 2 family.	0.761
DsimGD10466	DsimGD14489	B4QE77	B4QJZ3	GD10466.	GD14489; Belongs to the G-protein coupled receptor Fz/Smo family.	0.927
DsimGD10466	DsimGD14880	B4QE77	B4QRX8	GD10466.	GD14880.	0.706
DsimGD10466	DsimGD23059	B4QE77	B4NVY2	GD10466.	GD23059.	0.681
DsimGD10466	DsimGD25955	B4QE77	B4QAN4	GD10466.	GD25955.	0.988
DsimGD10467	DsimGD10750	B4QE78	B4QAL9	GD10467.	GD10750; Belongs to the G-protein coupled receptor 2 family.	0.761
DsimGD10467	DsimGD14489	B4QE78	B4QJZ3	GD10467.	GD14489; Belongs to the G-protein coupled receptor Fz/Smo family.	0.927
DsimGD10467	DsimGD14880	B4QE78	B4QRX8	GD10467.	GD14880.	0.706
DsimGD10467	DsimGD23059	B4QE78	B4NVY2	GD10467.	GD23059.	0.681
DsimGD10467	DsimGD25955	B4QE78	B4QAN4	GD10467.	GD25955.	0.988
DsimGD10742	DsimGD11158	B4QID9	B4QHF0	GD10742.	GD11158.	0.565
DsimGD10742	DsimGD14489	B4QID9	B4QJZ3	GD10742.	GD14489; Belongs to the G-protein coupled receptor Fz/Smo family.	0.624
DsimGD10750	DsimGD10466	B4QAL9	B4QE77	GD10750; Belongs to the G-protein coupled receptor 2 family.	GD10466.	0.761
DsimGD10750	DsimGD10467	B4QAL9	B4QE78	GD10750; Belongs to the G-protein coupled receptor 2 family.	GD10467.	0.761
DsimGD10750	DsimGD14489	B4QAL9	B4QJZ3	GD10750; Belongs to the G-protein coupled receptor 2 family.	GD14489; Belongs to the G-protein coupled receptor Fz/Smo family.	0.953
DsimGD10750	DsimGD14880	B4QAL9	B4QRX8	GD10750; Belongs to the G-protein coupled receptor 2 family.	GD14880.	0.847
DsimGD10750	DsimGD18602	B4QAL9	B4QX84	GD10750; Belongs to the G-protein coupled receptor 2 family.	GD18602.	0.694
DsimGD10750	DsimGD20451	B4QAL9	B4NVB6	GD10750; Belongs to the G-protein coupled receptor 2 family.	GD20451.	0.761
DsimGD10750	DsimGD23059	B4QAL9	B4NVY2	GD10750; Belongs to the G-protein coupled receptor 2 family.	GD23059.	0.688
DsimGD10750	DsimGD25955	B4QAL9	B4QAN4	GD10750; Belongs to the G-protein coupled receptor 2 family.	GD25955.	0.928