116 items (Drosophila simulans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DsimGD16504	GD16504. (466 aa)
	DsimGD23884	GD23884. (696 aa)
	DsimGD14857	CG6981 protein. (162 aa)
	DsimGD11984	GD11984. (319 aa)
	DsimGD12019	GD12019. (320 aa)
	DsimGD24613	GD24613. (267 aa)
	DsimGD24535	GD24535. (189 aa)
	DsimGD24451	GD24451. (380 aa)
	DsimGD11594	GD11594. (244 aa)
	DsimGD11701	GD11701. (160 aa)
	DsimGD13210	GD13210. (318 aa)
	DsimGD22666	GD22666. (377 aa)
	DsimGD24280	GD24280. (440 aa)
	DsimGD23318	GD23318. (2092 aa)
	DsimGD22127	GD22127. (267 aa)
	DsimGD24333	GD24333. (954 aa)
	DsimGD23957	GD23957. (968 aa)
	DsimGD22428	Receptor protein-tyrosine kinase. (1215 aa)
	DsimGD22427	GD22427. (196 aa)
	DsimGD21953	GD21953. (390 aa)
	DsimGD22933	GD22933. (238 aa)
	DsimGD22931	GD22931. (596 aa)
	DsimGD22386	GD22386. (1001 aa)
	dpp	Dpp. (455 aa)
	DsimGD22289	Mitogen-activated protein kinase. (372 aa)
	DsimGD23684	GD23684. (199 aa)
	DsimGD23691	GD23691. (314 aa)
	DsimGD23692	GD23692. (354 aa)
	DsimGD22248	GD22248; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1011 aa)
	DsimGD23242	GD23242. (81 aa)
	DsimGD22744	GD22744. (576 aa)
	DsimGD22743	GD22743. (391 aa)
	DsimGD23254	GD23254. (1439 aa)
	DsimGD21743	GD21743. (447 aa)
	DsimGD21741	GD21741. (400 aa)
	DsimGD21719	Condensin complex subunit 2; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. (809 aa)
	DsimGD11802	GD11802. (455 aa)
	DsimGD10771	GD10771. (2580 aa)
	DsimGD11296	GD11296. (1060 aa)
	DsimGD25889	GD25889. (330 aa)
	DsimGD25435	GD25435. (1312 aa)
	DsimGD10391	GD10391. (631 aa)
	DsimGD10334	GD10334. (882 aa)
	DsimGD11921	GD11921. (498 aa)
	DsimGD11439	GD11439. (751 aa)
	DsimGD25761	GD25761. (1361 aa)
	DsimGD25707	GD25707. (958 aa)
	DsimGD25233	GD25233. (410 aa)
	DsimGD25232	GD25232. (536 aa)
	DsimGD11601	GD11601. (705 aa)
	DsimGD11105	GD11105; Belongs to the integrin alpha chain family. (1115 aa)
	DsimGD10612	GD10612. (675 aa)
	DsimGD25590	GD25590. (1506 aa)
	DsimGD11656	GD11656. (130 aa)
	DsimGD11158	GD11158. (192 aa)
	DsimGD10037	GD10037. (532 aa)
	DsimGD25528	GD25528. (1326 aa)
	twi	Twist. (476 aa)
	DsimGD13173	GD13173. (422 aa)
	DsimGD12630	GD12630. (385 aa)
	DsimGD12627	GD12627. (382 aa)
	DsimGD14489	GD14489; Belongs to the G-protein coupled receptor Fz/Smo family. (415 aa)
	DsimGD14493	GD14493; Belongs to the cytochrome P450 family. (540 aa)
	DsimGD13031	GD13031. (1374 aa)
	DsimGD13571	GD13571. (199 aa)
	DsimGD14589	GD14589. (671 aa)
	DsimGD13487	GD13487. (192 aa)
	DsimGD13619	GD13619; Belongs to the peptidase S54 family. (355 aa)
	DsimGD13400	GD13400. (240 aa)
	LanB2	LanB2. (1575 aa)
	DsimGD12820	GD12820. (577 aa)
	DsimGD13808	GD13808; Belongs to the cytochrome P450 family. (489 aa)
	DsimGD12297	GD12297; Belongs to the G-protein coupled receptor Fz/Smo family. (693 aa)
	DsimGD14339	GD14339. (740 aa)
	DsimGD14850	GD14850. (1459 aa)
	DsimGD14851	GD14851. (2585 aa)
	DsimGD13192	GD13192. (1139 aa)
	DsimGD20060	Signal transducer and activator of transcription. (754 aa)
	DsimGD18809	GD18809. (680 aa)
	DsimGD21088	GD21088. (2287 aa)
	DsimGD18786	GD18786. (521 aa)
	DsimGD20735	GD20735. (682 aa)
	DsimGD19752	GD19752. (609 aa)
	DsimGD19135	Mothers against decapentaplegic homolog. (570 aa)
	Abd-B	Abd-B. (519 aa)
	DsimGD20268	GD20268. (631 aa)
	DsimUbx	Ultrabithorax. (338 aa)
	DsimGD18115	GD18115. (299 aa)
	DsimGD19066	GD19066. (736 aa)
	DsimGD19065	GD19065. (83 aa)
	DsimGD19064	GD19064. (696 aa)
	DsimGD21359	GD21359. (787 aa)
	DsimGD19533	GD19533. (189 aa)
	DsimGD19532	GD19532. (539 aa)
	DsimGD18513	GD18513. (482 aa)
	DsimGD18028	GD18028. (510 aa)
	DsimGD19518	GD19518. (463 aa)
	DsimGD19515	GD19515. (374 aa)
	DsimGD20410	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (516 aa)
	DsimGD20423	GD20423. (1017 aa)
	DsimGD19422	GD19422. (116 aa)
	tin	Tin. (208 aa)
	fzo	Fzo. (983 aa)
	DsimGD18390	GD18390. (355 aa)
	pnt	Pnt. (354 aa)
	pan	Pan. (500 aa)
	hop	Hop. (524 aa)
	N	Notch. (811 aa)
	DsimGD15896	GD15896; Belongs to the integrin alpha chain family. (985 aa)
	inx-4	Innexin; Structural component of the gap junctions. Belongs to the pannexin family. (347 aa)
	DsimGD15725	GD15725; Belongs to the integrin alpha chain family. (1343 aa)
	DsimGD16852	GD16852. (1734 aa)
	DsimGD16875	Integrin beta; Belongs to the integrin beta chain family. (838 aa)
	DsimGD15648	GD15648. (413 aa)
	DsimGD17412	GD17412; Belongs to the PDGF/VEGF growth factor family. (241 aa)
	l(1)sc	Lethal of scute. (257 aa)

Your Current Organism:

Drosophila simulans

NCBI taxonomy Id: 7240
Other names: D. simulans

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file format is 'PNG': portable network graphic

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same PNG format, but at higher resolution

... as a vector graphic:

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Abd-B	DsimGD19515	B4QWE8	B4QYY1	Abd-B.	GD19515.	0.719
Abd-B	DsimGD19518	B4QWE8	B4QYX7	Abd-B.	GD19518.	0.435
Abd-B	DsimGD20268	B4QWE8	B4QWF0	Abd-B.	GD20268.	0.727
Abd-B	DsimUbx	B4QWE8	B4QWF6	Abd-B.	Ultrabithorax.	0.746
Abd-B	dpp	B4QWE8	B4Q848	Abd-B.	Dpp.	0.493
Abd-B	twi	B4QWE8	B4QI46	Abd-B.	Twist.	0.411
DsimGD10037	DsimGD11158	B4QHU0	B4QHF0	GD10037.	GD11158.	0.500
DsimGD10037	DsimGD13487	B4QHU0	B4QLZ5	GD10037.	GD13487.	0.460
DsimGD10037	DsimGD18809	B4QHU0	B4QSY8	GD10037.	GD18809.	0.588
DsimGD10037	DsimGD19422	B4QHU0	B4R0Z9	GD10037.	GD19422.	0.888
DsimGD10037	DsimGD23691	B4QHU0	B4Q986	GD10037.	GD23691.	0.494
DsimGD10037	DsimGD23692	B4QHU0	B4Q987	GD10037.	GD23692.	0.494
DsimGD10037	tin	B4QHU0	B4R100	GD10037.	Tin.	0.888
DsimGD10037	twi	B4QHU0	B4QI46	GD10037.	Twist.	0.827
DsimGD10334	DsimGD11601	B4QCR7	B4QG50	GD10334.	GD11601.	0.515
DsimGD10334	DsimGD13400	B4QCR7	B4QN40	GD10334.	GD13400.	0.772
DsimGD10334	DsimGD13808	B4QCR7	B4QQ33	GD10334.	GD13808; Belongs to the cytochrome P450 family.	0.687
DsimGD10334	DsimGD14493	B4QCR7	B4QK08	GD10334.	GD14493; Belongs to the cytochrome P450 family.	0.706
DsimGD10334	DsimGD18028	B4QCR7	B4QYR8	GD10334.	GD18028.	0.415
DsimGD10334	DsimGD18809	B4QCR7	B4QSY8	GD10334.	GD18809.	0.617