48 items (Drosophila simulans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DsimGD11158	GD11158. (192 aa)
	twi	Twist. (476 aa)
	DsimGD13031	GD13031. (1374 aa)
	DsimGD13619	GD13619; Belongs to the peptidase S54 family. (355 aa)
	DsimGD13400	GD13400. (240 aa)
	DsimGD14339	GD14339. (740 aa)
	DsimGD18809	GD18809. (680 aa)
	DsimGD21088	GD21088. (2287 aa)
	DsimGD25435	GD25435. (1312 aa)
	DsimGD25889	GD25889. (330 aa)
	DsimGD22666	GD22666. (377 aa)
	DsimGD11296	GD11296. (1060 aa)
	DsimGD10771	GD10771. (2580 aa)
	DsimGD21719	Condensin complex subunit 2; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. (809 aa)
	DsimGD23254	GD23254. (1439 aa)
	DsimGD22743	GD22743. (391 aa)
	DsimGD22744	GD22744. (576 aa)
	DsimGD23242	GD23242. (81 aa)
	DsimGD23684	GD23684. (199 aa)
	dpp	Dpp. (455 aa)
	DsimGD22386	GD22386. (1001 aa)
	DsimGD22931	GD22931. (596 aa)
	DsimGD21953	GD21953. (390 aa)
	DsimGD19135	Mothers against decapentaplegic homolog. (570 aa)
	DsimGD18115	GD18115. (299 aa)
	DsimGD18028	GD18028. (510 aa)
	DsimGD20410	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (516 aa)
	DsimGD20423	GD20423. (1017 aa)
	DsimGD18390	GD18390. (355 aa)
	pnt	Pnt. (354 aa)
	N	Notch. (811 aa)
	DsimGD16852	GD16852. (1734 aa)
	DsimGD17412	GD17412; Belongs to the PDGF/VEGF growth factor family. (241 aa)
	DsimGD16504	GD16504. (466 aa)
	l(1)sc	Lethal of scute. (257 aa)
	DsimGD24280	GD24280. (440 aa)
	DsimGD22127	GD22127. (267 aa)
	DsimGD22428	Receptor protein-tyrosine kinase. (1215 aa)
	DsimGD22427	GD22427. (196 aa)
	DsimGD10334	GD10334. (882 aa)
	DsimGD11984	GD11984. (319 aa)
	DsimGD24613	GD24613. (267 aa)
	DsimGD13210	GD13210. (318 aa)
	DsimGD11921	GD11921. (498 aa)
	DsimGD11439	GD11439. (751 aa)
	DsimGD25707	GD25707. (958 aa)
	DsimGD11601	GD11601. (705 aa)
	DsimGD10612	GD10612. (675 aa)

Your Current Organism:

Drosophila simulans

NCBI taxonomy Id: 7240
Other names: D. simulans

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Export your current network:

... as a bitmap image:

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file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

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same PNG format, but at higher resolution

... as a vector graphic:

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DsimGD10334	DsimGD11601	B4QCR7	B4QG50	GD10334.	GD11601.	0.515
DsimGD10334	DsimGD13400	B4QCR7	B4QN40	GD10334.	GD13400.	0.772
DsimGD10334	DsimGD18028	B4QCR7	B4QYR8	GD10334.	GD18028.	0.415
DsimGD10334	DsimGD18809	B4QCR7	B4QSY8	GD10334.	GD18809.	0.617
DsimGD10612	DsimGD23242	B4QGN1	B4Q9M3	GD10612.	GD23242.	0.680
DsimGD10612	DsimGD23254	B4QGN1	B4Q9Q4	GD10612.	GD23254.	0.547
DsimGD10771	DsimGD20410	B4QB33	B4QZT3	GD10771.	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.611
DsimGD10771	dpp	B4QB33	B4Q848	GD10771.	Dpp.	0.823
DsimGD11158	DsimGD11296	B4QHF0	B4QBA9	GD11158.	GD11296.	0.618
DsimGD11158	DsimGD11601	B4QHF0	B4QG50	GD11158.	GD11601.	0.756
DsimGD11158	DsimGD13031	B4QHF0	B4QKY2	GD11158.	GD13031.	0.998
DsimGD11158	DsimGD13210	B4QHF0	B4NVJ5	GD11158.	GD13210.	0.618
DsimGD11158	DsimGD13619	B4QHF0	B4QM19	GD11158.	GD13619; Belongs to the peptidase S54 family.	0.586
DsimGD11158	DsimGD20423	B4QHF0	B4QZV4	GD11158.	GD20423.	0.947
DsimGD11158	DsimGD21088	B4QHF0	B4QT41	GD11158.	GD21088.	0.472
DsimGD11158	dpp	B4QHF0	B4Q848	GD11158.	Dpp.	0.453
DsimGD11296	DsimGD11158	B4QBA9	B4QHF0	GD11296.	GD11158.	0.618
DsimGD11296	DsimGD11601	B4QBA9	B4QG50	GD11296.	GD11601.	0.950
DsimGD11296	DsimGD19135	B4QBA9	B4QWC3	GD11296.	Mothers against decapentaplegic homolog.	0.994
DsimGD11296	DsimGD20410	B4QBA9	B4QZT3	GD11296.	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.558