45 items (Drosophila simulans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DsimGD24812	GD24812. (198 aa)
	ci	Cubitus interruptus, isoform A. (1402 aa)
	DsimGD22520	GD22520. (1006 aa)
	DsimGD22519	GD22519. (2395 aa)
	DsimGD22996	GD22996. (1161 aa)
	DsimGD23471	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (795 aa)
	Su(H)	Su(H). (594 aa)
	DsimGD22909	GD22909. (1405 aa)
	DsimGD23607	GD23607. (556 aa)
	DsimGD21828	GD21828. (197 aa)
	DsimGD23260	GD23260. (322 aa)
	DsimGD10839	GD10839. (143 aa)
	DsimGD11901	GD11901. (327 aa)
	DsimGD25679	GD25679. (439 aa)
	DsimGD11111	GD11111. (1066 aa)
	DsimGD25590	GD25590. (1506 aa)
	DsimGD25109	GD25109. (1429 aa)
	DsimGD12667	GD12667. (540 aa)
	DsimGD14485	GD14485. (66 aa)
	DsimGD14486	GD14486. (98 aa)
	DsimGD14489	GD14489; Belongs to the G-protein coupled receptor Fz/Smo family. (415 aa)
	DsimGD14509	GD14509. (64 aa)
	DsimGD14510	GD14510. (59 aa)
	DsimGD14132	GD14132. (127 aa)
	DsimGD14134	GD14134; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (560 aa)
	DsimGD12837	GD12837. (555 aa)
	DsimGD19363	GD19363. (653 aa)
	DsimGD20718	GD20718. (487 aa)
	DsimUbx	Ultrabithorax. (338 aa)
	DsimGD20292	GD20292. (1075 aa)
	DsimGD20824	GD20824. (671 aa)
	DsimGD18530	GD18530. (284 aa)
	DsimGD19518	GD19518. (463 aa)
	DsimGD19397	GD19397. (198 aa)
	DsimGD18873	GD18873; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (386 aa)
	DsimGD16405	GD16405. (169 aa)
	N	Notch. (811 aa)
	DsimGD15896	GD15896; Belongs to the integrin alpha chain family. (985 aa)
	DsimGD15845	GD15845. (300 aa)
	DsimNetB	NetB. (503 aa)
	DsimGD17261	GD17261. (376 aa)
	DsimGD15668	GD15668. (547 aa)
	DsimGD15666	GD15666. (638 aa)
	DsimGD16951	GD16951. (331 aa)
	E(spl)	Basic helix-loop-helix transcription factor. (179 aa)

Your Current Organism:

Drosophila simulans

NCBI taxonomy Id: 7240
Other names: D. simulans

Send network to Cytoscape

Export your current network:

... as a bitmap image:

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file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

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same PNG format, but at higher resolution

... as a vector graphic:

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DsimGD11111	DsimGD14132	B4QGG3	B4QML6	GD11111.	GD14132.	0.722
DsimGD11111	DsimGD14134	B4QGG3	B4QML8	GD11111.	GD14134; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.722
DsimGD11111	DsimGD15845	B4QGG3	B4R4V2	GD11111.	GD15845.	0.625
DsimGD11111	DsimGD25109	B4QGG3	B4QHL6	GD11111.	GD25109.	0.412
DsimGD11111	DsimGD25590	B4QGG3	B4QGZ8	GD11111.	GD25590.	0.603
DsimGD11111	DsimNetB	B4QGG3	B4R4V4	GD11111.	NetB.	0.871
DsimGD11901	DsimGD12667	B4QCK9	B4QJ20	GD11901.	GD12667.	0.802
DsimGD11901	DsimGD17261	B4QCK9	B4R5K9	GD11901.	GD17261.	0.910
DsimGD11901	DsimGD18530	B4QCK9	B4QYN0	GD11901.	GD18530.	0.443
DsimGD11901	DsimGD20718	B4QCK9	B4QV74	GD11901.	GD20718.	0.827
DsimGD11901	DsimGD23260	B4QCK9	B4QA34	GD11901.	GD23260.	0.486
DsimGD11901	N	B4QCK9	B4R3W6	GD11901.	Notch.	0.796
DsimGD11901	Su(H)	B4QCK9	B4Q5Z2	GD11901.	Su(H).	0.584
DsimGD12667	DsimGD11901	B4QJ20	B4QCK9	GD12667.	GD11901.	0.802
DsimGD12667	DsimGD15668	B4QJ20	B4R6N6	GD12667.	GD15668.	0.421
DsimGD12667	DsimGD17261	B4QJ20	B4R5K9	GD12667.	GD17261.	0.477
DsimGD12667	DsimGD18530	B4QJ20	B4QYN0	GD12667.	GD18530.	0.886
DsimGD12667	DsimGD20718	B4QJ20	B4QV74	GD12667.	GD20718.	0.516
DsimGD12667	DsimGD21828	B4QJ20	B4Q8V1	GD12667.	GD21828.	0.587
DsimGD12837	DsimGD20718	B4QPM2	B4QV74	GD12837.	GD20718.	0.601