89 items (Drosophila simulans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	en	Homeobox protein engrailed-like. (555 aa)
	DsimGD10802	Homeobox protein engrailed-like. (452 aa)
	DsimGD25001	GD25001. (220 aa)
	DsimGD21734	GD21734. (429 aa)
	DsimGD23246	GD23246. (500 aa)
	DsimGD21780	GD21780. (438 aa)
	DsimGD22269	GD22269. (281 aa)
	DsimGD21801	GD21801. (534 aa)
	DsimGD22947	GD22947. (237 aa)
	DsimGD23036	GD23036. (355 aa)
	DsimGD23020	GD23020. (410 aa)
	DsimGD22979	GD22979. (297 aa)
	DsimGD23847	POU domain protein. (889 aa)
	DsimGD23844	POU domain protein. (601 aa)
	DsimGD22610	GD22610. (417 aa)
	DsimGD22133	GD22133. (613 aa)
	DsimGD24280	GD24280. (440 aa)
	DsimGD16514	GD16514. (723 aa)
	Lim1	Lim1. (345 aa)
	DsimGD15666	GD15666. (638 aa)
	DsimGD15668	GD15668. (547 aa)
	DsimGD16098	GD16098. (196 aa)
	oc	GD16101. (631 aa)
	DsimGD16852	GD16852. (1734 aa)
	DsimGD17261	GD17261. (376 aa)
	DsimGD15807	POU domain protein. (266 aa)
	DsimGD16737	GD16737. (673 aa)
	DsimGD16257	GD16257. (651 aa)
	DsimGD24416	GD24416. (342 aa)
	DsimGD24406	GD24406. (2054 aa)
	DsimGD21552	GD21552. (592 aa)
	DsimGD21545	GD21545. (1053 aa)
	DsimGD19379	GD19379. (198 aa)
	DsimGD20010	GD20010. (318 aa)
	DsimGD19422	GD19422. (116 aa)
	bap	Bap. (382 aa)
	DsimGD19977	GD19977. (412 aa)
	DsimGD19976	GD19976. (479 aa)
	DsimGD18444	GD18444. (158 aa)
	DsimGD20470	GD20470. (526 aa)
	DsimGD18937	GD18937. (496 aa)
	DsimGD19430	GD19430. (339 aa)
	DsimGD19974	GD19974. (658 aa)
	DsimGD21441	GD21441. (514 aa)
	DsimGD20427	GD20427. (719 aa)
	DsimGD19515	GD19515. (374 aa)
	ftz	Ftz. (413 aa)
	DsimGD19518	GD19518. (463 aa)
	DsimGD19895	GD19895. (582 aa)
	bcd	Bicoid. (489 aa)
	DsimGD19522	GD19522. (351 aa)
	DsimGD19524	GD19524. (252 aa)
	DsimGD19525	GD19525. (789 aa)
	DsimGD19533	GD19533. (189 aa)
	DsimGD18113	GD18113. (345 aa)
	DsimUbx	Ultrabithorax. (338 aa)
	DsimGD20268	GD20268. (631 aa)
	Abd-B	Abd-B. (519 aa)
	DsimGD17768	GD17768. (189 aa)
	DsimGD20718	GD20718. (487 aa)
	DsimGD19218	GD19218. (610 aa)
	DsimGD19222	GD19222. (467 aa)
	DsimGD14396	GD14396. (641 aa)
	DsimGD14390	GD14390. (687 aa)
	DsimGD14388	GD14388. (597 aa)
	DsimGD12719	GD12719. (666 aa)
	DsimGD12721	GD12721. (635 aa)
	DsimGD14373	GD14373. (642 aa)
	DsimGD12730	GD12730. (527 aa)
	DsimGD13784	GD13784. (278 aa)
	DsimGD14043	GD14043. (321 aa)
	DsimGD12586	GD12586. (319 aa)
	DsimGD12614	GD12614. (644 aa)
	DsimGD13969	POU domain protein. (759 aa)
	DsimGD12161	GD12161. (392 aa)
	DsimGD25082	GD25082. (275 aa)
	DsimGD10643	GD10643. (479 aa)
	DsimGD10557	GD10557. (1046 aa)
	DsimGD25243	GD25243. (411 aa)
	DsimGD11547	GD11547. (903 aa)
	DsimGD25245	GD25245. (417 aa)
	DsimGD10533	GD10533. (292 aa)
	DsimGD11523	GD11523. (378 aa)
	DsimGD10477	GD10477. (129 aa)
	DsimGD11918	GD11918. (427 aa)
	DsimGD24898	GD24898. (449 aa)
	DsimGD25834	GD25834. (535 aa)
	DsimGD10352	GD10352. (469 aa)
	DsimGD11901	GD11901. (327 aa)

Your Current Organism:

Drosophila simulans

NCBI taxonomy Id: 7240
Other names: D. simulans

Send network to Cytoscape

Export your current network:

... as a bitmap image:

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file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

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same PNG format, but at higher resolution

... as a vector graphic:

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Abd-B	DsimGD17261	B4QWE8	B4R5K9	Abd-B.	GD17261.	0.997
Abd-B	DsimGD19515	B4QWE8	B4QYY1	Abd-B.	GD19515.	0.719
Abd-B	DsimGD19518	B4QWE8	B4QYX7	Abd-B.	GD19518.	0.435
Abd-B	DsimGD19895	B4QWE8	B4QYX5	Abd-B.	GD19895.	0.697
Abd-B	DsimGD20268	B4QWE8	B4QWF0	Abd-B.	GD20268.	0.727
Abd-B	DsimGD20718	B4QWE8	B4QV74	Abd-B.	GD20718.	0.839
Abd-B	DsimGD22979	B4QWE8	B4Q5N8	Abd-B.	GD22979.	0.453
Abd-B	DsimUbx	B4QWE8	B4QWF6	Abd-B.	Ultrabithorax.	0.746
Abd-B	ftz	B4QWE8	B4QYX9	Abd-B.	Ftz.	0.562
DsimGD10477	DsimGD12719	B4QE95	B4QRA5	GD10477.	GD12719.	0.602
DsimGD10477	DsimGD20718	B4QE95	B4QV74	GD10477.	GD20718.	0.531
DsimGD10477	DsimGD24416	B4QE95	B4R2H8	GD10477.	GD24416.	0.532
DsimGD10477	oc	B4QE95	B4R6K6	GD10477.	GD16101.	0.423
DsimGD10533	DsimGD11547	B4QF90	B4QFI8	GD10533.	GD11547.	0.580
DsimGD10533	DsimGD11901	B4QF90	B4QCK9	GD10533.	GD11901.	0.417
DsimGD10533	DsimGD12719	B4QF90	B4QRA5	GD10533.	GD12719.	0.720
DsimGD10533	DsimGD14396	B4QF90	B4QRQ3	GD10533.	GD14396.	0.519
DsimGD10533	DsimGD15807	B4QF90	B4R567	GD10533.	POU domain protein.	0.443
DsimGD10533	DsimGD16257	B4QF90	B4R4Z4	GD10533.	GD16257.	0.710
DsimGD10533	DsimGD16737	B4QF90	B4R4Z5	GD10533.	GD16737.	0.713