74 items (Drosophila simulans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Abd-B	Abd-B. (519 aa)
	DsimGD24280	GD24280. (440 aa)
	DsimGD22133	GD22133. (613 aa)
	DsimGD22610	GD22610. (417 aa)
	DsimGD23844	POU domain protein. (601 aa)
	DsimGD23847	POU domain protein. (889 aa)
	DsimGD23020	GD23020. (410 aa)
	DsimGD23036	GD23036. (355 aa)
	DsimGD22947	GD22947. (237 aa)
	DsimGD21801	GD21801. (534 aa)
	DsimGD21780	GD21780. (438 aa)
	DsimGD21734	GD21734. (429 aa)
	DsimGD25001	GD25001. (220 aa)
	DsimGD10802	Homeobox protein engrailed-like. (452 aa)
	en	Homeobox protein engrailed-like. (555 aa)
	DsimGD11901	GD11901. (327 aa)
	DsimGD10352	GD10352. (469 aa)
	DsimGD24898	GD24898. (449 aa)
	DsimGD11918	GD11918. (427 aa)
	DsimGD10477	GD10477. (129 aa)
	DsimGD11523	GD11523. (378 aa)
	DsimGD25245	GD25245. (417 aa)
	DsimGD11547	GD11547. (903 aa)
	DsimGD25243	GD25243. (411 aa)
	DsimGD10643	GD10643. (479 aa)
	DsimGD25082	GD25082. (275 aa)
	DsimGD12161	GD12161. (392 aa)
	DsimGD13969	POU domain protein. (759 aa)
	DsimGD12614	GD12614. (644 aa)
	DsimGD12586	GD12586. (319 aa)
	DsimGD14043	GD14043. (321 aa)
	DsimGD12730	GD12730. (527 aa)
	DsimGD14373	GD14373. (642 aa)
	DsimGD12721	GD12721. (635 aa)
	DsimGD14388	GD14388. (597 aa)
	DsimGD14390	GD14390. (687 aa)
	DsimGD14396	GD14396. (641 aa)
	DsimGD19222	GD19222. (467 aa)
	DsimGD19218	GD19218. (610 aa)
	DsimGD20268	GD20268. (631 aa)
	DsimUbx	Ultrabithorax. (338 aa)
	DsimGD18113	GD18113. (345 aa)
	DsimGD19533	GD19533. (189 aa)
	DsimGD19525	GD19525. (789 aa)
	DsimGD19524	GD19524. (252 aa)
	DsimGD19522	GD19522. (351 aa)
	bcd	Bicoid. (489 aa)
	DsimGD19895	GD19895. (582 aa)
	DsimGD19518	GD19518. (463 aa)
	ftz	Ftz. (413 aa)
	DsimGD19515	GD19515. (374 aa)
	DsimGD20427	GD20427. (719 aa)
	DsimGD21441	GD21441. (514 aa)
	DsimGD19974	GD19974. (658 aa)
	DsimGD19430	GD19430. (339 aa)
	DsimGD18937	GD18937. (496 aa)
	DsimGD20470	GD20470. (526 aa)
	DsimGD18444	GD18444. (158 aa)
	DsimGD19976	GD19976. (479 aa)
	DsimGD19977	GD19977. (412 aa)
	bap	Bap. (382 aa)
	DsimGD19422	GD19422. (116 aa)
	DsimGD20010	GD20010. (318 aa)
	DsimGD21545	GD21545. (1053 aa)
	DsimGD21552	GD21552. (592 aa)
	DsimGD24406	GD24406. (2054 aa)
	DsimGD16257	GD16257. (651 aa)
	DsimGD15807	POU domain protein. (266 aa)
	DsimGD17261	GD17261. (376 aa)
	DsimGD16852	GD16852. (1734 aa)
	oc	GD16101. (631 aa)
	DsimGD15668	GD15668. (547 aa)
	DsimGD15666	GD15666. (638 aa)
	DsimGD16514	GD16514. (723 aa)

Your Current Organism:

Drosophila simulans

NCBI taxonomy Id: 7240
Other names: D. simulans

Send network to Cytoscape

Export your current network:

... as a bitmap image:

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file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

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same PNG format, but at higher resolution

... as a vector graphic:

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Abd-B	DsimGD17261	B4QWE8	B4R5K9	Abd-B.	GD17261.	0.997
Abd-B	DsimGD19515	B4QWE8	B4QYY1	Abd-B.	GD19515.	0.719
Abd-B	DsimGD19518	B4QWE8	B4QYX7	Abd-B.	GD19518.	0.435
Abd-B	DsimGD19895	B4QWE8	B4QYX5	Abd-B.	GD19895.	0.697
Abd-B	DsimGD20268	B4QWE8	B4QWF0	Abd-B.	GD20268.	0.727
Abd-B	DsimUbx	B4QWE8	B4QWF6	Abd-B.	Ultrabithorax.	0.746
Abd-B	ftz	B4QWE8	B4QYX9	Abd-B.	Ftz.	0.562
DsimGD10477	oc	B4QE95	B4R6K6	GD10477.	GD16101.	0.423
DsimGD10643	DsimGD17261	B4QGU2	B4R5K9	GD10643.	GD17261.	0.522
DsimGD10802	en	B4QBL9	B4QBM1	Homeobox protein engrailed-like.	Homeobox protein engrailed-like.	0.470
DsimGD11523	DsimGD15807	B4QF19	B4R567	GD11523.	POU domain protein.	0.790
DsimGD11523	DsimGD22947	B4QF19	B4Q662	GD11523.	GD22947.	0.988
DsimGD11901	DsimGD17261	B4QCK9	B4R5K9	GD11901.	GD17261.	0.910
DsimGD11901	DsimGD21801	B4QCK9	B4Q8Z7	GD11901.	GD21801.	0.444
DsimGD11901	DsimGD23844	B4QCK9	B4Q476	GD11901.	POU domain protein.	0.420
DsimGD11918	ftz	B4QD61	B4QYX9	GD11918.	Ftz.	0.601
DsimGD12161	DsimGD12721	B4QJ70	B4QRA1	GD12161.	GD12721.	0.430
DsimGD12161	DsimGD19422	B4QJ70	B4R0Z9	GD12161.	GD19422.	0.523
DsimGD12161	DsimGD19974	B4QJ70	B4R0E6	GD12161.	GD19974.	0.585
DsimGD12161	DsimGD21801	B4QJ70	B4Q8Z7	GD12161.	GD21801.	0.523