32 items (Drosophila simulans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DsimGD19525	GD19525. (789 aa)
	DsimGD24280	GD24280. (440 aa)
	DsimGD22610	GD22610. (417 aa)
	DsimGD21734	GD21734. (429 aa)
	DsimGD10802	Homeobox protein engrailed-like. (452 aa)
	en	Homeobox protein engrailed-like. (555 aa)
	DsimGD11901	GD11901. (327 aa)
	DsimGD11523	GD11523. (378 aa)
	DsimGD10643	GD10643. (479 aa)
	DsimGD12614	GD12614. (644 aa)
	DsimGD12586	GD12586. (319 aa)
	DsimGD14043	GD14043. (321 aa)
	Abd-B	Abd-B. (519 aa)
	DsimGD20268	GD20268. (631 aa)
	DsimUbx	Ultrabithorax. (338 aa)
	DsimGD18113	GD18113. (345 aa)
	DsimGD19533	GD19533. (189 aa)
	DsimGD19524	GD19524. (252 aa)
	DsimGD19522	GD19522. (351 aa)
	DsimGD19895	GD19895. (582 aa)
	DsimGD19518	GD19518. (463 aa)
	ftz	Ftz. (413 aa)
	DsimGD19515	GD19515. (374 aa)
	DsimGD20427	GD20427. (719 aa)
	DsimGD21441	GD21441. (514 aa)
	DsimGD19974	GD19974. (658 aa)
	DsimGD19430	GD19430. (339 aa)
	DsimGD18444	GD18444. (158 aa)
	bap	Bap. (382 aa)
	DsimGD19422	GD19422. (116 aa)
	DsimGD20010	GD20010. (318 aa)
	DsimGD15668	GD15668. (547 aa)

Your Current Organism:

Drosophila simulans

NCBI taxonomy Id: 7240
Other names: D. simulans

Send network to Cytoscape

Export your current network:

... as a bitmap image:

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file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

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same PNG format, but at higher resolution

... as a vector graphic:

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Abd-B	DsimGD19515	B4QWE8	B4QYY1	Abd-B.	GD19515.	0.719
Abd-B	DsimGD19518	B4QWE8	B4QYX7	Abd-B.	GD19518.	0.435
Abd-B	DsimGD19895	B4QWE8	B4QYX5	Abd-B.	GD19895.	0.697
Abd-B	DsimGD20268	B4QWE8	B4QWF0	Abd-B.	GD20268.	0.727
Abd-B	DsimUbx	B4QWE8	B4QWF6	Abd-B.	Ultrabithorax.	0.746
Abd-B	ftz	B4QWE8	B4QYX9	Abd-B.	Ftz.	0.562
DsimGD10802	en	B4QBL9	B4QBM1	Homeobox protein engrailed-like.	Homeobox protein engrailed-like.	0.470
DsimGD12614	DsimGD20010	B4QK07	B4R151	GD12614.	GD20010.	0.575
DsimGD19515	Abd-B	B4QYY1	B4QWE8	GD19515.	Abd-B.	0.719
DsimGD19515	DsimGD19518	B4QYY1	B4QYX7	GD19515.	GD19518.	0.829
DsimGD19515	DsimGD19895	B4QYY1	B4QYX5	GD19515.	GD19895.	0.584
DsimGD19515	DsimGD20268	B4QYY1	B4QWF0	GD19515.	GD20268.	0.923
DsimGD19515	DsimUbx	B4QYY1	B4QWF6	GD19515.	Ultrabithorax.	0.661
DsimGD19518	Abd-B	B4QYX7	B4QWE8	GD19518.	Abd-B.	0.435
DsimGD19518	DsimGD19515	B4QYX7	B4QYY1	GD19518.	GD19515.	0.829
DsimGD19518	DsimGD19525	B4QYX7	B4QYW7	GD19518.	GD19525.	0.633
DsimGD19518	DsimGD19895	B4QYX7	B4QYX5	GD19518.	GD19895.	0.805
DsimGD19518	DsimGD20268	B4QYX7	B4QWF0	GD19518.	GD20268.	0.887
DsimGD19518	DsimUbx	B4QYX7	B4QWF6	GD19518.	Ultrabithorax.	0.418
DsimGD19518	ftz	B4QYX7	B4QYX9	GD19518.	Ftz.	0.829