(9 nodes) Innexin network (Drosophila simulans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DsimGD13120	Innexin; Structural component of the gap junctions. Belongs to the pannexin family. (367 aa)
	DsimGD15600	Innexin; Structural component of the gap junctions. Belongs to the pannexin family. (397 aa)
	inx-4	Innexin; Structural component of the gap junctions. Belongs to the pannexin family. (347 aa)
	inx-3	Innexin; Structural component of the gap junctions. Belongs to the pannexin family. (434 aa)
	inx-2	Innexin; Structural component of the gap junctions. Belongs to the pannexin family. (362 aa)
	DsimGD18012	Innexin; Structural component of the gap junctions. Belongs to the pannexin family. (395 aa)
	DsimGD17854	GD17854. (81 aa)
	inx	Innexin; Structural component of the gap junctions. Belongs to the pannexin family. (243 aa)
	DsimGD24658	Innexin; Structural component of the gap junctions. Belongs to the pannexin family. (132 aa)

Your Current Organism:

Drosophila simulans

NCBI taxonomy Id: 7240
Other names: D. simulans

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DsimGD13120	inx-2	B4QJF4	B4R5W1	Innexin; Structural component of the gap junctions. Belongs to the pannexin family.	Innexin; Structural component of the gap junctions. Belongs to the pannexin family.	0.623
DsimGD13120	inx-4	B4QJF4	B4R5W4	Innexin; Structural component of the gap junctions. Belongs to the pannexin family.	Innexin; Structural component of the gap junctions. Belongs to the pannexin family.	0.435
DsimGD18012	inx-2	B4QYU3	B4R5W1	Innexin; Structural component of the gap junctions. Belongs to the pannexin family.	Innexin; Structural component of the gap junctions. Belongs to the pannexin family.	0.739
DsimGD18012	inx-4	B4QYU3	B4R5W4	Innexin; Structural component of the gap junctions. Belongs to the pannexin family.	Innexin; Structural component of the gap junctions. Belongs to the pannexin family.	0.415
DsimGD24658	inx	B4NTQ3	B4NUS9	Innexin; Structural component of the gap junctions. Belongs to the pannexin family.	Innexin; Structural component of the gap junctions. Belongs to the pannexin family.	0.541
inx	DsimGD24658	B4NUS9	B4NTQ3	Innexin; Structural component of the gap junctions. Belongs to the pannexin family.	Innexin; Structural component of the gap junctions. Belongs to the pannexin family.	0.541
inx-2	DsimGD13120	B4R5W1	B4QJF4	Innexin; Structural component of the gap junctions. Belongs to the pannexin family.	Innexin; Structural component of the gap junctions. Belongs to the pannexin family.	0.623
inx-2	DsimGD18012	B4R5W1	B4QYU3	Innexin; Structural component of the gap junctions. Belongs to the pannexin family.	Innexin; Structural component of the gap junctions. Belongs to the pannexin family.	0.739
inx-2	inx-4	B4R5W1	B4R5W4	Innexin; Structural component of the gap junctions. Belongs to the pannexin family.	Innexin; Structural component of the gap junctions. Belongs to the pannexin family.	0.446
inx-4	DsimGD13120	B4R5W4	B4QJF4	Innexin; Structural component of the gap junctions. Belongs to the pannexin family.	Innexin; Structural component of the gap junctions. Belongs to the pannexin family.	0.435
inx-4	DsimGD18012	B4R5W4	B4QYU3	Innexin; Structural component of the gap junctions. Belongs to the pannexin family.	Innexin; Structural component of the gap junctions. Belongs to the pannexin family.	0.415
inx-4	inx-2	B4R5W4	B4R5W1	Innexin; Structural component of the gap junctions. Belongs to the pannexin family.	Innexin; Structural component of the gap junctions. Belongs to the pannexin family.	0.446