8 items (Drosophila virilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DvirGJ18873	Uncharacterized protein, isoform B. (1182 aa)
	DvirGJ15999	Uncharacterized protein, isoform B; Belongs to the STXBP/unc-18/SEC1 family. (602 aa)
	DvirGJ11142	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (213 aa)
	DvirGJ20156	Uncharacterized protein, isoform A. (152 aa)
	DvirGJ23976	Uncharacterized protein, isoform E. (2785 aa)
	DvirGJ14160	Uncharacterized protein, isoform D; Belongs to the MAGUK family. (906 aa)
	DvirGJ18528	t-SNARE coiled-coil homology domain-containing protein. (315 aa)
	DVIR88_6g0043	Uncharacterized protein. (3494 aa)

Your Current Organism:

Drosophila virilis

NCBI taxonomy Id: 7244
Other names: D. virilis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DVIR88_6g0043	DvirGJ11142	D0Z7E8	A0A0Q9WJA9	Uncharacterized protein.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.620
DVIR88_6g0043	DvirGJ14160	D0Z7E8	B4MC57	Uncharacterized protein.	Uncharacterized protein, isoform D; Belongs to the MAGUK family.	0.945
DVIR88_6g0043	DvirGJ15999	D0Z7E8	A0A0Q9WEV9	Uncharacterized protein.	Uncharacterized protein, isoform B; Belongs to the STXBP/unc-18/SEC1 family.	0.770
DVIR88_6g0043	DvirGJ18528	D0Z7E8	B4MG63	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.649
DVIR88_6g0043	DvirGJ18873	D0Z7E8	A0A0Q9WC54	Uncharacterized protein.	Uncharacterized protein, isoform B.	0.437
DVIR88_6g0043	DvirGJ20156	D0Z7E8	B4LKC4	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.647
DVIR88_6g0043	DvirGJ23976	D0Z7E8	B4LZH2	Uncharacterized protein.	Uncharacterized protein, isoform E.	0.999
DvirGJ11142	DVIR88_6g0043	A0A0Q9WJA9	D0Z7E8	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	Uncharacterized protein.	0.620
DvirGJ11142	DvirGJ14160	A0A0Q9WJA9	B4MC57	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	Uncharacterized protein, isoform D; Belongs to the MAGUK family.	0.947
DvirGJ11142	DvirGJ15999	A0A0Q9WJA9	A0A0Q9WEV9	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	Uncharacterized protein, isoform B; Belongs to the STXBP/unc-18/SEC1 family.	0.910
DvirGJ11142	DvirGJ18528	A0A0Q9WJA9	B4MG63	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	t-SNARE coiled-coil homology domain-containing protein.	0.886
DvirGJ11142	DvirGJ18873	A0A0Q9WJA9	A0A0Q9WC54	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	Uncharacterized protein, isoform B.	0.475
DvirGJ11142	DvirGJ20156	A0A0Q9WJA9	B4LKC4	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	Uncharacterized protein, isoform A.	0.882
DvirGJ11142	DvirGJ23976	A0A0Q9WJA9	B4LZH2	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	Uncharacterized protein, isoform E.	0.963
DvirGJ14160	DVIR88_6g0043	B4MC57	D0Z7E8	Uncharacterized protein, isoform D; Belongs to the MAGUK family.	Uncharacterized protein.	0.945
DvirGJ14160	DvirGJ11142	B4MC57	A0A0Q9WJA9	Uncharacterized protein, isoform D; Belongs to the MAGUK family.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.947
DvirGJ14160	DvirGJ15999	B4MC57	A0A0Q9WEV9	Uncharacterized protein, isoform D; Belongs to the MAGUK family.	Uncharacterized protein, isoform B; Belongs to the STXBP/unc-18/SEC1 family.	0.947
DvirGJ14160	DvirGJ18528	B4MC57	B4MG63	Uncharacterized protein, isoform D; Belongs to the MAGUK family.	t-SNARE coiled-coil homology domain-containing protein.	0.948
DvirGJ14160	DvirGJ18873	B4MC57	A0A0Q9WC54	Uncharacterized protein, isoform D; Belongs to the MAGUK family.	Uncharacterized protein, isoform B.	0.999
DvirGJ14160	DvirGJ20156	B4MC57	B4LKC4	Uncharacterized protein, isoform D; Belongs to the MAGUK family.	Uncharacterized protein, isoform A.	0.943