32 items (Drosophila virilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DvirGJ12560	Brix domain-containing protein. (351 aa)
	DvirGJ11797	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (441 aa)
	DvirGJ12069	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (347 aa)
	DvirGJ20890	Uncharacterized protein. (419 aa)
	GJ22246	Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (780 aa)
	DvirGJ21693	Uncharacterized protein; Belongs to the DEAD box helicase family. (784 aa)
	DvirGJ19965	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (259 aa)
	DvirGJ21111	Uncharacterized protein. (671 aa)
	DvirGJ21808	Uncharacterized protein. (819 aa)
	DvirGJ22462	WD_REPEATS_REGION domain-containing protein. (569 aa)
	GJ14807	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (633 aa)
	GJ17641	Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. (419 aa)
	DvirGJ20668	Brix domain-containing protein. (395 aa)
	DvirGJ23588	60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (180 aa)
	DvirGJ23500	Brix domain-containing protein. (415 aa)
	DvirGJ23450	ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. (829 aa)
	DvirGJ23196	Uncharacterized protein. (439 aa)
	DvirGJ23143	Uncharacterized protein, isoform A; Belongs to the DEAD box helicase family. (670 aa)
	DvirGJ22554	Uncharacterized protein. (271 aa)
	DvirGJ22542	Brix domain-containing protein. (314 aa)
	DvirGJ23050	RRM domain-containing protein. (366 aa)
	DvirGJ10246	Nucleolar complex protein 3 homolog. (825 aa)
	DvirGJ10181	SURF6 domain-containing protein. (330 aa)
	DvirGJ10591	CP-type G domain-containing protein. (581 aa)
	DvirGJ10510	Uncharacterized protein. (307 aa)
	DvirGJ18198	Uncharacterized protein. (573 aa)
	DvirGJ18264	Uncharacterized protein. (681 aa)
	DvirGJ15847	Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. (831 aa)
	DvirGJ15568	Uncharacterized protein. (564 aa)
	DvirGJ15324	PUM-HD domain-containing protein. (672 aa)
	DvirGJ15389	Protein MAK16 homolog; Belongs to the MAK16 family. (348 aa)
	DvirGJ18081	SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (840 aa)

Your Current Organism:

Drosophila virilis

NCBI taxonomy Id: 7244
Other names: D. virilis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DvirGJ10181	DvirGJ10246	B4M4S6	B4M4F6	SURF6 domain-containing protein.	Nucleolar complex protein 3 homolog.	0.540
DvirGJ10181	DvirGJ10510	B4M4S6	B4M5U9	SURF6 domain-containing protein.	Uncharacterized protein.	0.982
DvirGJ10181	DvirGJ10591	B4M4S6	B4M5J2	SURF6 domain-containing protein.	CP-type G domain-containing protein.	0.909
DvirGJ10181	DvirGJ11797	B4M4S6	B4LDP6	SURF6 domain-containing protein.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.712
DvirGJ10181	DvirGJ12069	B4M4S6	B4LH49	SURF6 domain-containing protein.	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	0.884
DvirGJ10181	DvirGJ12560	B4M4S6	B4LBQ6	SURF6 domain-containing protein.	Brix domain-containing protein.	0.967
DvirGJ10181	DvirGJ15324	B4M4S6	B4MCX2	SURF6 domain-containing protein.	PUM-HD domain-containing protein.	0.741
DvirGJ10181	DvirGJ15389	B4M4S6	B4MD95	SURF6 domain-containing protein.	Protein MAK16 homolog; Belongs to the MAK16 family.	0.967
DvirGJ10181	DvirGJ15568	B4M4S6	B4MB01	SURF6 domain-containing protein.	Uncharacterized protein.	0.722
DvirGJ10181	DvirGJ15847	B4M4S6	B4MA57	SURF6 domain-containing protein.	Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.	0.886
DvirGJ10181	DvirGJ18081	B4M4S6	B4MDU5	SURF6 domain-containing protein.	SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.712
DvirGJ10181	DvirGJ18198	B4M4S6	B4M8W4	SURF6 domain-containing protein.	Uncharacterized protein.	0.944
DvirGJ10181	DvirGJ18264	B4M4S6	B4M977	SURF6 domain-containing protein.	Uncharacterized protein.	0.974
DvirGJ10181	DvirGJ19965	B4M4S6	B4LMG3	SURF6 domain-containing protein.	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.893
DvirGJ10181	DvirGJ20668	B4M4S6	B4LSF5	SURF6 domain-containing protein.	Brix domain-containing protein.	0.972
DvirGJ10181	DvirGJ20890	B4M4S6	B4LIK3	SURF6 domain-containing protein.	Uncharacterized protein.	0.926
DvirGJ10181	DvirGJ21111	B4M4S6	B4LMM0	SURF6 domain-containing protein.	Uncharacterized protein.	0.874
DvirGJ10181	DvirGJ21693	B4M4S6	B4LL73	SURF6 domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.568
DvirGJ10181	DvirGJ21808	B4M4S6	B4LMU0	SURF6 domain-containing protein.	Uncharacterized protein.	0.602
DvirGJ10181	DvirGJ22462	B4M4S6	B4LNM8	SURF6 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.902