6 items (Drosophila virilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DvirGJ13737	Uncharacterized protein. (474 aa)
	DvirGJ12723	Uncharacterized protein. (421 aa)
	DvirGJ16886	Uncharacterized protein. (410 aa)
	DvirGJ24482	Glyco_tran_28_C domain-containing protein. (171 aa)
	DvirGJ23978	Uncharacterized protein. (450 aa)
	DvirGJ16486	Uncharacterized protein. (195 aa)

Your Current Organism:

Drosophila virilis

NCBI taxonomy Id: 7244
Other names: D. virilis

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DvirGJ12723	DvirGJ13737	B4LGX4	B4LFP1	Uncharacterized protein.	Uncharacterized protein.	0.968
DvirGJ12723	DvirGJ16486	B4LGX4	B4M7B7	Uncharacterized protein.	Uncharacterized protein.	0.617
DvirGJ12723	DvirGJ16886	B4LGX4	B4LT07	Uncharacterized protein.	Uncharacterized protein.	0.694
DvirGJ12723	DvirGJ23978	B4LGX4	B4LZH7	Uncharacterized protein.	Uncharacterized protein.	0.992
DvirGJ12723	DvirGJ24482	B4LGX4	B4LYI8	Uncharacterized protein.	Glyco_tran_28_C domain-containing protein.	0.734
DvirGJ13737	DvirGJ12723	B4LFP1	B4LGX4	Uncharacterized protein.	Uncharacterized protein.	0.968
DvirGJ13737	DvirGJ16486	B4LFP1	B4M7B7	Uncharacterized protein.	Uncharacterized protein.	0.716
DvirGJ13737	DvirGJ16886	B4LFP1	B4LT07	Uncharacterized protein.	Uncharacterized protein.	0.769
DvirGJ13737	DvirGJ23978	B4LFP1	B4LZH7	Uncharacterized protein.	Uncharacterized protein.	0.711
DvirGJ13737	DvirGJ24482	B4LFP1	B4LYI8	Uncharacterized protein.	Glyco_tran_28_C domain-containing protein.	0.808
DvirGJ16486	DvirGJ12723	B4M7B7	B4LGX4	Uncharacterized protein.	Uncharacterized protein.	0.617
DvirGJ16486	DvirGJ13737	B4M7B7	B4LFP1	Uncharacterized protein.	Uncharacterized protein.	0.716
DvirGJ16486	DvirGJ16886	B4M7B7	B4LT07	Uncharacterized protein.	Uncharacterized protein.	0.976
DvirGJ16486	DvirGJ23978	B4M7B7	B4LZH7	Uncharacterized protein.	Uncharacterized protein.	0.973
DvirGJ16486	DvirGJ24482	B4M7B7	B4LYI8	Uncharacterized protein.	Glyco_tran_28_C domain-containing protein.	0.999
DvirGJ16886	DvirGJ12723	B4LT07	B4LGX4	Uncharacterized protein.	Uncharacterized protein.	0.694
DvirGJ16886	DvirGJ13737	B4LT07	B4LFP1	Uncharacterized protein.	Uncharacterized protein.	0.769
DvirGJ16886	DvirGJ16486	B4LT07	B4M7B7	Uncharacterized protein.	Uncharacterized protein.	0.976
DvirGJ16886	DvirGJ23978	B4LT07	B4LZH7	Uncharacterized protein.	Uncharacterized protein.	0.769
DvirGJ16886	DvirGJ24482	B4LT07	B4LYI8	Uncharacterized protein.	Glyco_tran_28_C domain-containing protein.	0.993