49 items (Drosophila virilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DvirGJ12573	Uncharacterized protein, isoform B. (302 aa)
	DvirGJ13459	Uncharacterized protein, isoform B. (263 aa)
	DvirGJ11898	Uncharacterized protein. (102 aa)
	DvirGJ19691	Uncharacterized protein, isoform B. (787 aa)
	DvirGJ12574	Uncharacterized protein, isoform A. (518 aa)
	DvirGJ12572	Uncharacterized protein, isoform A. (448 aa)
	DvirGJ12831	Uncharacterized protein, isoform B. (456 aa)
	DvirGJ12880	Uncharacterized protein. (322 aa)
	DvirGJ11882	Uncharacterized protein. (187 aa)
	DvirGJ13494	Uncharacterized protein. (198 aa)
	DvirGJ12946	Uncharacterized protein. (185 aa)
	DvirGJ11740	Uncharacterized protein. (451 aa)
	DvirGJ12238	Uncharacterized protein. (160 aa)
	DvirGJ13136	Uncharacterized protein. (127 aa)
	DvirGJ13137	Uncharacterized protein. (139 aa)
	DvirGJ12142	Uncharacterized protein, isoform A. (414 aa)
	DvirGJ12082	Uncharacterized protein. (120 aa)
	DvirGJ13281	Uncharacterized protein. (119 aa)
	DvirGJ11428	Uncharacterized protein. (208 aa)
	DvirGJ12684	Uncharacterized protein. (107 aa)
	DvirGJ12683	Uncharacterized protein. (111 aa)
	DvirGJ12738	Uncharacterized protein. (110 aa)
	DvirGJ12742	Uncharacterized protein. (102 aa)
	DvirGJ12677	Uncharacterized protein. (106 aa)
	DvirGJ12743	Uncharacterized protein. (264 aa)
	DvirGJ21646	Uncharacterized protein. (174 aa)
	DvirGJ20637	Uncharacterized protein. (117 aa)
	DvirGJ20634	Uncharacterized protein. (126 aa)
	DvirGJ20631	Uncharacterized protein. (130 aa)
	DvirGJ20030	Uncharacterized protein. (133 aa)
	DvirGJ20028	Uncharacterized protein. (126 aa)
	DvirGJ20022	Uncharacterized protein. (173 aa)
	DvirGJ21806	Uncharacterized protein. (217 aa)
	DvirGJ21381	Uncharacterized protein. (666 aa)
	DvirGJ15323	N-acetyltransferase domain-containing protein. (217 aa)
	DvirGJ17553	Uncharacterized protein. (105 aa)
	DvirGJ21003	C-type lectin domain-containing protein. (219 aa)
	DvirGJ17272	C-type lectin domain-containing protein. (233 aa)
	DvirGJ14252	Uncharacterized protein. (211 aa)
	DvirGJ14515	Uncharacterized protein. (176 aa)
	DvirGJ23431	C-type lectin domain-containing protein. (220 aa)
	DvirGJ23389	Uncharacterized protein. (362 aa)
	DvirGJ23943	Uncharacterized protein. (207 aa)
	DvirGJ16758	Uncharacterized protein. (229 aa)
	DvirGJ16779	Uncharacterized protein, isoform A. (232 aa)
	DvirGJ16629	N-acetyltransferase domain-containing protein. (217 aa)
	DvirGJ15017	Uncharacterized protein. (137 aa)
	DvirGJ15073	Uncharacterized protein. (196 aa)
	DvirGJ15011	Uncharacterized protein. (119 aa)

Your Current Organism:

Drosophila virilis

NCBI taxonomy Id: 7244
Other names: D. virilis

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DvirGJ11428	DvirGJ11882	B4LHB8	B4LCK8	Uncharacterized protein.	Uncharacterized protein.	0.477
DvirGJ11428	DvirGJ12684	B4LHB8	B4LHE7	Uncharacterized protein.	Uncharacterized protein.	0.440
DvirGJ11428	DvirGJ13459	B4LHB8	A0A0Q9WJ80	Uncharacterized protein.	Uncharacterized protein, isoform B.	0.514
DvirGJ11428	DvirGJ13494	B4LHB8	B4LCK9	Uncharacterized protein.	Uncharacterized protein.	0.471
DvirGJ11428	DvirGJ14252	B4LHB8	B4LUX7	Uncharacterized protein.	Uncharacterized protein.	0.537
DvirGJ11428	DvirGJ15011	B4LHB8	B4MFL9	Uncharacterized protein.	Uncharacterized protein.	0.499
DvirGJ11428	DvirGJ15017	B4LHB8	B4MFL3	Uncharacterized protein.	Uncharacterized protein.	0.541
DvirGJ11428	DvirGJ15073	B4LHB8	B4MFL4	Uncharacterized protein.	Uncharacterized protein.	0.507
DvirGJ11428	DvirGJ16758	B4LHB8	B4M872	Uncharacterized protein.	Uncharacterized protein.	0.462
DvirGJ11428	DvirGJ17553	B4LHB8	B4LRD7	Uncharacterized protein.	Uncharacterized protein.	0.524
DvirGJ11428	DvirGJ20028	B4LHB8	B4LLT0	Uncharacterized protein.	Uncharacterized protein.	0.532
DvirGJ11428	DvirGJ20030	B4LHB8	B4LLS9	Uncharacterized protein.	Uncharacterized protein.	0.550
DvirGJ11428	DvirGJ20631	B4LHB8	B4LLB3	Uncharacterized protein.	Uncharacterized protein.	0.441
DvirGJ11428	DvirGJ21646	B4LHB8	B4LKL1	Uncharacterized protein.	Uncharacterized protein.	0.563
DvirGJ11428	DvirGJ21806	B4LHB8	B4LMT5	Uncharacterized protein.	Uncharacterized protein.	0.536
DvirGJ11428	DvirGJ23389	B4LHB8	B4LY01	Uncharacterized protein.	Uncharacterized protein.	0.446
DvirGJ11428	DvirGJ23943	B4LHB8	B4LZ41	Uncharacterized protein.	Uncharacterized protein.	0.503
DvirGJ11740	DvirGJ12573	B4LED6	A0A0Q9WHE5	Uncharacterized protein.	Uncharacterized protein, isoform B.	0.464
DvirGJ11740	DvirGJ19691	B4LED6	A0A0Q9WXI3	Uncharacterized protein.	Uncharacterized protein, isoform B.	0.418
DvirGJ11882	DvirGJ11428	B4LCK8	B4LHB8	Uncharacterized protein.	Uncharacterized protein.	0.477