(33 nodes) Spliceosomal snRNP complex, and Transferrin network (Drosophila virilis)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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Your Input:
	DvirGJ20669	Transferrin; Transferrins are iron binding transport proteins which bind Fe(3+) ion in association with the binding of an anion, usually bicarbonate. (737 aa)
	DvirGJ25685	RRM domain-containing protein. (278 aa)
	DvirGJ25672	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (94 aa)
	DvirGJ17895	Uncharacterized protein, isoform B. (111 aa)
	DvirGJ11852	Uncharacterized protein. (931 aa)
	DvirGJ11781	Uncharacterized protein. (2142 aa)
	DvirGJ11498	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (124 aa)
	DvirGJ13230	Uncharacterized protein, isoform A. (1229 aa)
	DvirGJ13847	Nop domain-containing protein. (503 aa)
	DvirGJ13322	Uncharacterized protein; Belongs to the DEAD box helicase family. (797 aa)
	DvirGJ12004	RRM domain-containing protein. (121 aa)
	DvirGJ20260	Uncharacterized protein. (262 aa)
	DvirGJ21558	Sm domain-containing protein; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (88 aa)
	DvirGJ19907	Small nuclear ribonucleoprotein Sm D3. (151 aa)
	DvirGJ22442	MPN domain-containing protein. (2397 aa)
	DvirGJ17470	Uncharacterized protein. (961 aa)
	DvirGJ21434	RRM domain-containing protein. (454 aa)
	DvirGJ10895	PSP domain-containing protein. (748 aa)
	DvirGJ16945	C3H1-type domain-containing protein. (132 aa)
	DvirGJ19964	Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
	DvirGJ17767	Uncharacterized protein. (835 aa)
	DvirGJ17786	TOG domain-containing protein. (1334 aa)
	DvirGJ24581	WD_REPEATS_REGION domain-containing protein. (347 aa)
	DvirGJ14598	Small nuclear ribonucleoprotein-associated protein. (198 aa)
	snRNP-U1-C	U1 small nuclear ribonucleoprotein C; Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA; Belongs to the U1 small nuclear ribonucleoprotein C family. (144 aa)
	DvirGJ22766	Tr-type G domain-containing protein. (976 aa)
	DvirGJ24148	Uncharacterized protein. (187 aa)
	DvirGJ10878	Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (85 aa)
	DvirGJ16850	Uncharacterized protein. (216 aa)
	DvirGJ15655	Uncharacterized protein. (340 aa)
	DvirGJ15956	Small nuclear ribonucleoprotein G. (76 aa)
	DvirGJ14487	Small nuclear ribonucleoprotein Sm D2. (119 aa)
	DvirGJ15388	Uncharacterized protein, isoform A. (1028 aa)

Your Current Organism:

Drosophila virilis

NCBI taxonomy Id: 7244
Other names: D. virilis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DvirGJ10878	DvirGJ10895	B4M456	B4LT17	Splicing factor 3B subunit 5; Belongs to the SF3B5 family.	PSP domain-containing protein.	0.999
DvirGJ10878	DvirGJ11498	B4M456	B4LGG6	Splicing factor 3B subunit 5; Belongs to the SF3B5 family.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.980
DvirGJ10878	DvirGJ11781	B4M456	B4LDY9	Splicing factor 3B subunit 5; Belongs to the SF3B5 family.	Uncharacterized protein.	0.985
DvirGJ10878	DvirGJ11852	B4M456	B4LD46	Splicing factor 3B subunit 5; Belongs to the SF3B5 family.	Uncharacterized protein.	0.885
DvirGJ10878	DvirGJ12004	B4M456	B4LI81	Splicing factor 3B subunit 5; Belongs to the SF3B5 family.	RRM domain-containing protein.	0.999
DvirGJ10878	DvirGJ13230	B4M456	B4LGJ1	Splicing factor 3B subunit 5; Belongs to the SF3B5 family.	Uncharacterized protein, isoform A.	0.999
DvirGJ10878	DvirGJ13322	B4M456	B4LHL4	Splicing factor 3B subunit 5; Belongs to the SF3B5 family.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.994
DvirGJ10878	DvirGJ13847	B4M456	B4LGU8	Splicing factor 3B subunit 5; Belongs to the SF3B5 family.	Nop domain-containing protein.	0.857
DvirGJ10878	DvirGJ14487	B4M456	B4MBN3	Splicing factor 3B subunit 5; Belongs to the SF3B5 family.	Small nuclear ribonucleoprotein Sm D2.	0.992
DvirGJ10878	DvirGJ14598	B4M456	B4LVC8	Splicing factor 3B subunit 5; Belongs to the SF3B5 family.	Small nuclear ribonucleoprotein-associated protein.	0.935
DvirGJ10878	DvirGJ15388	B4M456	B4MD91	Splicing factor 3B subunit 5; Belongs to the SF3B5 family.	Uncharacterized protein, isoform A.	0.951
DvirGJ10878	DvirGJ15655	B4M456	B4MAJ0	Splicing factor 3B subunit 5; Belongs to the SF3B5 family.	Uncharacterized protein.	0.999
DvirGJ10878	DvirGJ15956	B4M456	B4MAP8	Splicing factor 3B subunit 5; Belongs to the SF3B5 family.	Small nuclear ribonucleoprotein G.	0.988
DvirGJ10878	DvirGJ16850	B4M456	B4M6U0	Splicing factor 3B subunit 5; Belongs to the SF3B5 family.	Uncharacterized protein.	0.972
DvirGJ10878	DvirGJ16945	B4M456	B4LT24	Splicing factor 3B subunit 5; Belongs to the SF3B5 family.	C3H1-type domain-containing protein.	0.928
DvirGJ10878	DvirGJ17470	B4M456	B4LQI3	Splicing factor 3B subunit 5; Belongs to the SF3B5 family.	Uncharacterized protein.	0.978
DvirGJ10878	DvirGJ17767	B4M456	B4LTJ5	Splicing factor 3B subunit 5; Belongs to the SF3B5 family.	Uncharacterized protein.	0.703
DvirGJ10878	DvirGJ17786	B4M456	B4LTN6	Splicing factor 3B subunit 5; Belongs to the SF3B5 family.	TOG domain-containing protein.	0.999
DvirGJ10878	DvirGJ17895	B4M456	A0A0Q9WB69	Splicing factor 3B subunit 5; Belongs to the SF3B5 family.	Uncharacterized protein, isoform B.	0.999
DvirGJ10878	DvirGJ19907	B4M456	B4LNH9	Splicing factor 3B subunit 5; Belongs to the SF3B5 family.	Small nuclear ribonucleoprotein Sm D3.	0.964