7 items (Drosophila virilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DvirGJ12883	Uncharacterized protein. (392 aa)
	flower	Calcium channel flower; A calcium channel that regulates synaptic endocytosis and hence couples exo- with endocytosis. Required in the nervous system and necessary in photoreceptor cells (By similarity). (196 aa)
	DvirGJ17622	Uncharacterized protein. (1013 aa)
	DvirGJ24048	Uncharacterized protein. (135 aa)
	DvirGJ18879	Uncharacterized protein, isoform B. (420 aa)
	DvirGJ16827	Uncharacterized protein, isoform A. (415 aa)
	DvirGJ16936	Uncharacterized protein. (460 aa)

Your Current Organism:

Drosophila virilis

NCBI taxonomy Id: 7244
Other names: D. virilis

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DvirGJ16827	DvirGJ17622	B4M6P8	B4LS50	Uncharacterized protein, isoform A.	Uncharacterized protein.	0.544
DvirGJ16827	DvirGJ24048	B4M6P8	B4M080	Uncharacterized protein, isoform A.	Uncharacterized protein.	0.544
DvirGJ16936	DvirGJ24048	B4M775	B4M080	Uncharacterized protein.	Uncharacterized protein.	0.837
DvirGJ17622	DvirGJ16827	B4LS50	B4M6P8	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.544
DvirGJ17622	DvirGJ24048	B4LS50	B4M080	Uncharacterized protein.	Uncharacterized protein.	0.545
DvirGJ24048	DvirGJ16827	B4M080	B4M6P8	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.544
DvirGJ24048	DvirGJ16936	B4M080	B4M775	Uncharacterized protein.	Uncharacterized protein.	0.837
DvirGJ24048	DvirGJ17622	B4M080	B4LS50	Uncharacterized protein.	Uncharacterized protein.	0.545