10 items (Drosophila virilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DvirGJ11935	Uncharacterized protein. (1747 aa)
	DvirGJ21069	Uncharacterized protein. (402 aa)
	DvirGJ19797	Uncharacterized protein, isoform A. (388 aa)
	DvirGJ17345	WD_REPEATS_REGION domain-containing protein. (821 aa)
	DvirGJ14640	Uncharacterized protein, isoform A. (434 aa)
	DvirGJ19345	Uncharacterized protein. (491 aa)
	DvirGJ10871	Uncharacterized protein. (574 aa)
	DvirGJ10147	Uncharacterized protein. (655 aa)
	DvirGJ18348	Uncharacterized protein. (850 aa)
	DvirGJ14411	Uncharacterized protein. (608 aa)

Your Current Organism:

Drosophila virilis

NCBI taxonomy Id: 7244
Other names: D. virilis

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DvirGJ10147	DvirGJ10871	B4M4X7	B4M448	Uncharacterized protein.	Uncharacterized protein.	0.987
DvirGJ10147	DvirGJ11935	B4M4X7	B4LBX2	Uncharacterized protein.	Uncharacterized protein.	0.982
DvirGJ10147	DvirGJ14411	B4M4X7	B4MBD1	Uncharacterized protein.	Uncharacterized protein.	0.978
DvirGJ10147	DvirGJ14640	B4M4X7	B4LVE8	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.993
DvirGJ10147	DvirGJ17345	B4M4X7	B4LUN5	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.991
DvirGJ10147	DvirGJ18348	B4M4X7	B4M9M8	Uncharacterized protein.	Uncharacterized protein.	0.986
DvirGJ10147	DvirGJ19345	B4M4X7	B4M1P1	Uncharacterized protein.	Uncharacterized protein.	0.983
DvirGJ10147	DvirGJ19797	B4M4X7	B4LTJ7	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.948
DvirGJ10147	DvirGJ21069	B4M4X7	B4LRU0	Uncharacterized protein.	Uncharacterized protein.	0.981
DvirGJ10871	DvirGJ10147	B4M448	B4M4X7	Uncharacterized protein.	Uncharacterized protein.	0.987
DvirGJ10871	DvirGJ11935	B4M448	B4LBX2	Uncharacterized protein.	Uncharacterized protein.	0.982
DvirGJ10871	DvirGJ14411	B4M448	B4MBD1	Uncharacterized protein.	Uncharacterized protein.	0.983
DvirGJ10871	DvirGJ14640	B4M448	B4LVE8	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.994
DvirGJ10871	DvirGJ17345	B4M448	B4LUN5	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.991
DvirGJ10871	DvirGJ18348	B4M448	B4M9M8	Uncharacterized protein.	Uncharacterized protein.	0.995
DvirGJ10871	DvirGJ19345	B4M448	B4M1P1	Uncharacterized protein.	Uncharacterized protein.	0.992
DvirGJ10871	DvirGJ19797	B4M448	B4LTJ7	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.990
DvirGJ10871	DvirGJ21069	B4M448	B4LRU0	Uncharacterized protein.	Uncharacterized protein.	0.994
DvirGJ11935	DvirGJ10147	B4LBX2	B4M4X7	Uncharacterized protein.	Uncharacterized protein.	0.982
DvirGJ11935	DvirGJ10871	B4LBX2	B4M448	Uncharacterized protein.	Uncharacterized protein.	0.982