17 items (Drosophila virilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DvirGJ15381	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (479 aa)
	DvirGJ15046	Ribosomal_L18_c domain-containing protein. (299 aa)
	DvirGJ13973	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family. (150 aa)
	DvirGJ12560	Brix domain-containing protein. (351 aa)
	DvirGJ12535	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family. (276 aa)
	DvirGJ13582	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (317 aa)
	DvirGJ13779	Uncharacterized protein. (354 aa)
	DvirGJ19965	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (259 aa)
	DvirGJ19693	WD_REPEATS_REGION domain-containing protein. (488 aa)
	DvirGJ17795	Uncharacterized protein. (519 aa)
	DvirGJ17194	Ribosomal_L16 domain-containing protein. (219 aa)
	DvirGJ23500	Brix domain-containing protein. (415 aa)
	DvirGJ22542	Brix domain-containing protein. (314 aa)
	DvirGJ24129	Ribosomal_L6e_N domain-containing protein. (262 aa)
	DvirGJ18392	Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (5496 aa)
	DvirGJ10992	FtsJ domain-containing protein. (254 aa)
	DvirGJ11194	Ribosomal_L16 domain-containing protein. (218 aa)

Your Current Organism:

Drosophila virilis

NCBI taxonomy Id: 7244
Other names: D. virilis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DvirGJ10992	DvirGJ12535	B4M4R8	B4LBU6	FtsJ domain-containing protein.	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	0.674
DvirGJ10992	DvirGJ12560	B4M4R8	B4LBQ6	FtsJ domain-containing protein.	Brix domain-containing protein.	0.743
DvirGJ10992	DvirGJ13582	B4M4R8	B4LE06	FtsJ domain-containing protein.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.587
DvirGJ10992	DvirGJ13973	B4M4R8	B4LBH4	FtsJ domain-containing protein.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.	0.542
DvirGJ10992	DvirGJ15381	B4M4R8	B4MD84	FtsJ domain-containing protein.	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.	0.784
DvirGJ10992	DvirGJ17795	B4M4R8	B4LTQ1	FtsJ domain-containing protein.	Uncharacterized protein.	0.489
DvirGJ10992	DvirGJ19965	B4M4R8	B4LMG3	FtsJ domain-containing protein.	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.587
DvirGJ10992	DvirGJ22542	B4M4R8	B4M0W7	FtsJ domain-containing protein.	Brix domain-containing protein.	0.641
DvirGJ10992	DvirGJ23500	B4M4R8	B4LWU8	FtsJ domain-containing protein.	Brix domain-containing protein.	0.431
DvirGJ11194	DvirGJ12535	B4MCB4	B4LBU6	Ribosomal_L16 domain-containing protein.	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	0.988
DvirGJ11194	DvirGJ13582	B4MCB4	B4LE06	Ribosomal_L16 domain-containing protein.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.991
DvirGJ11194	DvirGJ13973	B4MCB4	B4LBH4	Ribosomal_L16 domain-containing protein.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.	0.915
DvirGJ11194	DvirGJ15046	B4MCB4	A0A0Q9WH39	Ribosomal_L16 domain-containing protein.	Ribosomal_L18_c domain-containing protein.	0.990
DvirGJ11194	DvirGJ15381	B4MCB4	B4MD84	Ribosomal_L16 domain-containing protein.	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.	0.835
DvirGJ11194	DvirGJ17194	B4MCB4	B4LTR0	Ribosomal_L16 domain-containing protein.	Ribosomal_L16 domain-containing protein.	0.900
DvirGJ11194	DvirGJ19965	B4MCB4	B4LMG3	Ribosomal_L16 domain-containing protein.	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.895
DvirGJ11194	DvirGJ24129	B4MCB4	B4M101	Ribosomal_L16 domain-containing protein.	Ribosomal_L6e_N domain-containing protein.	0.985
DvirGJ12535	DvirGJ10992	B4LBU6	B4M4R8	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	FtsJ domain-containing protein.	0.674
DvirGJ12535	DvirGJ11194	B4LBU6	B4MCB4	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	Ribosomal_L16 domain-containing protein.	0.988
DvirGJ12535	DvirGJ12560	B4LBU6	B4LBQ6	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	Brix domain-containing protein.	0.867