18 items (Drosophila virilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DvirGJ21843	Uncharacterized protein, isoform B. (390 aa)
	DvirGJ14390	Uncharacterized protein. (2083 aa)
	DvirGJ15847	Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. (831 aa)
	DvirGJ16547	Uncharacterized protein. (105 aa)
	DvirGJ19466	RRM domain-containing protein. (239 aa)
	DvirGJ25685	RRM domain-containing protein. (278 aa)
	DvirGJ11305	Uncharacterized protein. (423 aa)
	DvirGJ13045	Kri1_C domain-containing protein. (849 aa)
	DvirGJ12069	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (347 aa)
	GJ22246	Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (780 aa)
	DvirGJ22278	Uncharacterized protein. (296 aa)
	DvirGJ20080	CLP1_P domain-containing protein. (967 aa)
	DvirGJ20003	Uncharacterized protein. (300 aa)
	DvirGJ21784	Uncharacterized protein. (668 aa)
	GJ14807	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (633 aa)
	GJ17641	Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. (419 aa)
	DvirGJ22758	Uncharacterized protein. (232 aa)
	DvirGJ23053	HRDC domain-containing protein. (904 aa)

Your Current Organism:

Drosophila virilis

NCBI taxonomy Id: 7244
Other names: D. virilis

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DvirGJ11305	DvirGJ20003	B4LC44	B4LLW4	Uncharacterized protein.	Uncharacterized protein.	0.999
DvirGJ11305	DvirGJ22278	B4LC44	B4LL43	Uncharacterized protein.	Uncharacterized protein.	0.999
DvirGJ11305	DvirGJ22758	B4LC44	B4LVK2	Uncharacterized protein.	Uncharacterized protein.	0.695
DvirGJ11305	DvirGJ23053	B4LC44	B4M173	Uncharacterized protein.	HRDC domain-containing protein.	0.998
DvirGJ12069	DvirGJ13045	B4LH49	B4LEJ4	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	Kri1_C domain-containing protein.	0.615
DvirGJ12069	DvirGJ14390	B4LH49	B4MB94	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	Uncharacterized protein.	0.472
DvirGJ12069	DvirGJ15847	B4LH49	B4MA57	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.	0.879
DvirGJ12069	DvirGJ19466	B4LH49	B4M2C8	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	RRM domain-containing protein.	0.631
DvirGJ12069	DvirGJ21784	B4LH49	B4LMA6	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	Uncharacterized protein.	0.763
DvirGJ12069	DvirGJ23053	B4LH49	B4M173	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	HRDC domain-containing protein.	0.793
DvirGJ12069	GJ14807	B4LH49	B4LQD0	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	0.957
DvirGJ12069	GJ17641	B4LH49	B4LS78	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.	0.938
DvirGJ12069	GJ22246	B4LH49	B4LKS9	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.	0.858
DvirGJ13045	DvirGJ12069	B4LEJ4	B4LH49	Kri1_C domain-containing protein.	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	0.615
DvirGJ13045	DvirGJ14390	B4LEJ4	B4MB94	Kri1_C domain-containing protein.	Uncharacterized protein.	0.465
DvirGJ13045	DvirGJ15847	B4LEJ4	B4MA57	Kri1_C domain-containing protein.	Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.	0.781
DvirGJ13045	DvirGJ19466	B4LEJ4	B4M2C8	Kri1_C domain-containing protein.	RRM domain-containing protein.	0.614
DvirGJ13045	DvirGJ23053	B4LEJ4	B4M173	Kri1_C domain-containing protein.	HRDC domain-containing protein.	0.483
DvirGJ13045	GJ14807	B4LEJ4	B4LQD0	Kri1_C domain-containing protein.	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	0.633
DvirGJ13045	GJ22246	B4LEJ4	B4LKS9	Kri1_C domain-containing protein.	Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.	0.554