7 items (Drosophila virilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DvirGJ21843	Uncharacterized protein, isoform B. (390 aa)
	DvirGJ25685	RRM domain-containing protein. (278 aa)
	DvirGJ11305	Uncharacterized protein. (423 aa)
	DvirGJ22278	Uncharacterized protein. (296 aa)
	DvirGJ20003	Uncharacterized protein. (300 aa)
	DvirGJ22758	Uncharacterized protein. (232 aa)
	DvirGJ23053	HRDC domain-containing protein. (904 aa)

Your Current Organism:

Drosophila virilis

NCBI taxonomy Id: 7244
Other names: D. virilis

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DvirGJ11305	DvirGJ20003	B4LC44	B4LLW4	Uncharacterized protein.	Uncharacterized protein.	0.999
DvirGJ11305	DvirGJ22278	B4LC44	B4LL43	Uncharacterized protein.	Uncharacterized protein.	0.999
DvirGJ11305	DvirGJ22758	B4LC44	B4LVK2	Uncharacterized protein.	Uncharacterized protein.	0.695
DvirGJ11305	DvirGJ23053	B4LC44	B4M173	Uncharacterized protein.	HRDC domain-containing protein.	0.998
DvirGJ20003	DvirGJ11305	B4LLW4	B4LC44	Uncharacterized protein.	Uncharacterized protein.	0.999
DvirGJ20003	DvirGJ22278	B4LLW4	B4LL43	Uncharacterized protein.	Uncharacterized protein.	0.999
DvirGJ20003	DvirGJ22758	B4LLW4	B4LVK2	Uncharacterized protein.	Uncharacterized protein.	0.793
DvirGJ20003	DvirGJ23053	B4LLW4	B4M173	Uncharacterized protein.	HRDC domain-containing protein.	0.998
DvirGJ22278	DvirGJ11305	B4LL43	B4LC44	Uncharacterized protein.	Uncharacterized protein.	0.999
DvirGJ22278	DvirGJ20003	B4LL43	B4LLW4	Uncharacterized protein.	Uncharacterized protein.	0.999
DvirGJ22278	DvirGJ22758	B4LL43	B4LVK2	Uncharacterized protein.	Uncharacterized protein.	0.799
DvirGJ22278	DvirGJ23053	B4LL43	B4M173	Uncharacterized protein.	HRDC domain-containing protein.	0.998
DvirGJ22758	DvirGJ11305	B4LVK2	B4LC44	Uncharacterized protein.	Uncharacterized protein.	0.695
DvirGJ22758	DvirGJ20003	B4LVK2	B4LLW4	Uncharacterized protein.	Uncharacterized protein.	0.793
DvirGJ22758	DvirGJ22278	B4LVK2	B4LL43	Uncharacterized protein.	Uncharacterized protein.	0.799
DvirGJ22758	DvirGJ23053	B4LVK2	B4M173	Uncharacterized protein.	HRDC domain-containing protein.	0.553
DvirGJ23053	DvirGJ11305	B4M173	B4LC44	HRDC domain-containing protein.	Uncharacterized protein.	0.998
DvirGJ23053	DvirGJ20003	B4M173	B4LLW4	HRDC domain-containing protein.	Uncharacterized protein.	0.998
DvirGJ23053	DvirGJ22278	B4M173	B4LL43	HRDC domain-containing protein.	Uncharacterized protein.	0.998
DvirGJ23053	DvirGJ22758	B4M173	B4LVK2	HRDC domain-containing protein.	Uncharacterized protein.	0.553